Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.34□□□□□ -1.55
TPM1P09493 AL161636.2-201ENST00000445179 927 ntBASIC5.34□□□□□ -1.55
TPM1P09493 IGHV5-78-201ENST00000450948 295 ntBASIC5.34□□□□□ -1.55
TPM1P09493 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.34□□□□□ -1.55
TPM1P09493 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.34□□□□□ -1.55
TPM1P09493 AC079075.1-201ENST00000559543 878 ntBASIC5.34□□□□□ -1.55
TPM1P09493 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.34□□□□□ -1.55
TPM1P09493 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.34□□□□□ -1.55
TPM1P09493 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.34□□□□□ -1.55
TPM1P09493 AC006453.5-201ENST00000636451 619 ntBASIC5.34□□□□□ -1.55
TPM1P09493 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.34□□□□□ -1.55
TPM1P09493 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TPM1P09493 AC007382.1-201ENST00000624376 2618 ntBASIC5.34□□□□□ -1.55
TPM1P09493 TLK1P1-201ENST00000456760 2440 ntBASIC5.34□□□□□ -1.56
TPM1P09493 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
TPM1P09493 AC011493.1-201ENST00000596753 1632 ntBASIC5.34□□□□□ -1.56
TPM1P09493 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TPM1P09493 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.33□□□□□ -1.56
TPM1P09493 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TPM1P09493 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TPM1P09493 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.33□□□□□ -1.56
TPM1P09493 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TPM1P09493 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.33□□□□□ -1.56
TPM1P09493 EIF4EP1-201ENST00000422311 642 ntBASIC5.33□□□□□ -1.56
TPM1P09493 DDX39BP1-205ENST00000422507 192 ntBASIC5.33□□□□□ -1.56
TPM1P09493 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.33□□□□□ -1.56
TPM1P09493 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM1P09493 KNOP1P3-201ENST00000446933 426 ntBASIC5.33□□□□□ -1.56
TPM1P09493 HSPE1P22-201ENST00000456856 327 ntBASIC5.33□□□□□ -1.56
TPM1P09493 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM1P09493 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.33□□□□□ -1.56
TPM1P09493 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.33□□□□□ -1.56
TPM1P09493 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.33□□□□□ -1.56
TPM1P09493 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TPM1P09493 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM1P09493 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.33□□□□□ -1.56
TPM1P09493 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM1P09493 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.33□□□□□ -1.56
TPM1P09493 AC133552.5-201ENST00000604266 540 ntBASIC5.33□□□□□ -1.56
TPM1P09493 AC005377.1-201ENST00000605126 456 ntBASIC5.33□□□□□ -1.56
TPM1P09493 AC026979.4-201ENST00000606555 645 ntBASIC5.33□□□□□ -1.56
TPM1P09493 AC091979.2-201ENST00000607514 214 ntBASIC5.33□□□□□ -1.56
TPM1P09493 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TPM1P09493 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TPM1P09493 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TPM1P09493 AL445487.1-201ENST00000415694 1580 ntBASIC5.33□□□□□ -1.56
TPM1P09493 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TPM1P09493 EOGT-210ENST00000615922 1931 ntBASIC5.33□□□□□ -1.56
TPM1P09493 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TPM1P09493 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM1P09493 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TPM1P09493 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.32□□□□□ -1.56
TPM1P09493 AL592182.3-201ENST00000642132 3304 ntBASIC5.32□□□□□ -1.56
TPM1P09493 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TPM1P09493 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TPM1P09493 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM1P09493 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM1P09493 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM1P09493 RNU1-20P-201ENST00000363314 162 ntBASIC5.32□□□□□ -1.56
TPM1P09493 CXADRP1-201ENST00000398098 1095 ntBASIC5.32□□□□□ -1.56
TPM1P09493 HMGB3P7-201ENST00000400214 611 ntBASIC5.32□□□□□ -1.56
TPM1P09493 Z97832.1-201ENST00000402490 328 ntBASIC5.32□□□□□ -1.56
TPM1P09493 AL121834.1-202ENST00000404494 277 ntBASIC5.32□□□□□ -1.56
TPM1P09493 OR2X1P-201ENST00000421144 687 ntBASIC5.32□□□□□ -1.56
TPM1P09493 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.32□□□□□ -1.56
TPM1P09493 AL451139.1-201ENST00000434718 346 ntBASIC5.32□□□□□ -1.56
TPM1P09493 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.32□□□□□ -1.56
TPM1P09493 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TPM1P09493 AP000281.1-201ENST00000444036 316 ntBASIC5.32□□□□□ -1.56
TPM1P09493 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.32□□□□□ -1.56
TPM1P09493 RN7SL184P-201ENST00000488308 297 ntBASIC5.32□□□□□ -1.56
TPM1P09493 AC104971.1-201ENST00000495117 578 ntBASIC5.32□□□□□ -1.56
TPM1P09493 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.32□□□□□ -1.56
TPM1P09493 AC026688.1-201ENST00000520639 1168 ntBASIC5.32□□□□□ -1.56
TPM1P09493 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.32□□□□□ -1.56
TPM1P09493 AP001804.2-201ENST00000533932 910 ntBASIC5.32□□□□□ -1.56
TPM1P09493 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.32□□□□□ -1.56
TPM1P09493 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.32□□□□□ -1.56
TPM1P09493 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TPM1P09493 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.32□□□□□ -1.56
TPM1P09493 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.32□□□□□ -1.56
TPM1P09493 AC008521.2-201ENST00000591021 259 ntBASIC5.32□□□□□ -1.56
TPM1P09493 AC105254.2-201ENST00000603636 436 ntBASIC5.32□□□□□ -1.56
TPM1P09493 CXADRP3-202ENST00000617265 1100 ntBASIC5.32□□□□□ -1.56
TPM1P09493 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.32□□□□□ -1.56
TPM1P09493 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.32□□□□□ -1.56
TPM1P09493 AC005086.4-201ENST00000623065 213 ntBASIC5.32□□□□□ -1.56
TPM1P09493 AC099494.2-201ENST00000623371 978 ntBASIC5.32□□□□□ -1.56
TPM1P09493 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TPM1P09493 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM1P09493 THAP12P8-201ENST00000447914 2115 ntBASIC5.32□□□□□ -1.56
TPM1P09493 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TPM1P09493 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.31□□□□□ -1.56
TPM1P09493 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TPM1P09493 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TPM1P09493 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.31□□□□□ -1.56
TPM1P09493 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TPM1P09493 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TPM1P09493 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.31□□□□□ -1.56
TPM1P09493 RNU1-108P-201ENST00000362556 161 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms