Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL450263.2-201ENST00000439400 589 ntBASIC5.14□□□□□ -1.59
RETP07949 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.14□□□□□ -1.59
RETP07949 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.14□□□□□ -1.59
RETP07949 AC079168.1-201ENST00000458741 345 ntBASIC5.14□□□□□ -1.59
RETP07949 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.14□□□□□ -1.59
RETP07949 AC058823.1-201ENST00000485315 474 ntBASIC5.14□□□□□ -1.59
RETP07949 RPS12P31-201ENST00000491419 398 ntBASIC5.14□□□□□ -1.59
RETP07949 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.14□□□□□ -1.59
RETP07949 GAPDHP56-201ENST00000506031 988 ntBASIC5.14□□□□□ -1.59
RETP07949 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.14□□□□□ -1.59
RETP07949 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.14□□□□□ -1.59
RETP07949 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.14□□□□□ -1.59
RETP07949 MIR4675-201ENST00000577898 77 ntBASIC5.14□□□□□ -1.59
RETP07949 AC233702.9-201ENST00000581528 203 ntBASIC5.14□□□□□ -1.59
RETP07949 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.14□□□□□ -1.59
RETP07949 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.14□□□□□ -1.59
RETP07949 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.14□□□□□ -1.59
RETP07949 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RETP07949 AL590392.1-201ENST00000604960 446 ntBASIC5.14□□□□□ -1.59
RETP07949 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.14□□□□□ -1.59
RETP07949 AL359757.1-201ENST00000623176 255 ntBASIC5.14□□□□□ -1.59
RETP07949 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.14□□□□□ -1.59
RETP07949 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RETP07949 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RETP07949 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RETP07949 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RETP07949 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RETP07949 AL360270.2-201ENST00000562952 5985 ntBASIC5.14□□□□□ -1.59
RETP07949 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
RETP07949 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.14□□□□□ -1.59
RETP07949 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RETP07949 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RETP07949 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RETP07949 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RETP07949 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RETP07949 AC104623.2-202ENST00000623477 4002 ntBASIC5.13□□□□□ -1.59
RETP07949 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.13□□□□□ -1.59
RETP07949 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RETP07949 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RETP07949 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RETP07949 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RETP07949 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.13□□□□□ -1.59
RETP07949 MIR137-201ENST00000385223 102 ntBASIC5.13□□□□□ -1.59
RETP07949 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.13□□□□□ -1.59
RETP07949 MIR298-201ENST00000401212 88 ntBASIC5.13□□□□□ -1.59
RETP07949 DBIP1-201ENST00000401435 260 ntBASIC5.13□□□□□ -1.59
RETP07949 RPL21P67-201ENST00000402896 478 ntBASIC5.13□□□□□ -1.59
RETP07949 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.13□□□□□ -1.59
RETP07949 RN7SKP114-201ENST00000410327 279 ntBASIC5.13□□□□□ -1.59
RETP07949 RNA5SP113-201ENST00000410486 84 ntBASIC5.13□□□□□ -1.59
RETP07949 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.13□□□□□ -1.59
RETP07949 AC069213.2-201ENST00000420238 366 ntBASIC5.13□□□□□ -1.59
RETP07949 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.13□□□□□ -1.59
RETP07949 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.13□□□□□ -1.59
RETP07949 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.13□□□□□ -1.59
RETP07949 RPL34P20-201ENST00000442771 351 ntBASIC5.13□□□□□ -1.59
RETP07949 AC020898.1-201ENST00000474167 787 ntBASIC5.13□□□□□ -1.59
RETP07949 NPM1P29-201ENST00000483112 803 ntBASIC5.13□□□□□ -1.59
RETP07949 AC069304.1-201ENST00000491593 704 ntBASIC5.13□□□□□ -1.59
RETP07949 AC011005.3-201ENST00000491624 395 ntBASIC5.13□□□□□ -1.59
RETP07949 MYL12BP2-201ENST00000503948 512 ntBASIC5.13□□□□□ -1.59
RETP07949 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.13□□□□□ -1.59
RETP07949 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.13□□□□□ -1.59
RETP07949 RPS27AP18-201ENST00000515536 459 ntBASIC5.13□□□□□ -1.59
RETP07949 RN7SKP92-201ENST00000517266 244 ntBASIC5.13□□□□□ -1.59
RETP07949 AP002981.1-201ENST00000517692 975 ntBASIC5.13□□□□□ -1.59
RETP07949 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.13□□□□□ -1.59
RETP07949 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.13□□□□□ -1.59
RETP07949 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RETP07949 GCSHP4-201ENST00000538792 439 ntBASIC5.13□□□□□ -1.59
RETP07949 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.13□□□□□ -1.59
RETP07949 OR11H3P-201ENST00000554547 982 ntBASIC5.13□□□□□ -1.59
RETP07949 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.13□□□□□ -1.59
RETP07949 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.13□□□□□ -1.59
RETP07949 AC124856.1-201ENST00000600819 896 ntBASIC5.13□□□□□ -1.59
RETP07949 AC068790.7-201ENST00000602347 528 ntBASIC5.13□□□□□ -1.59
RETP07949 AL137072.1-201ENST00000603444 466 ntBASIC5.13□□□□□ -1.59
RETP07949 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.13□□□□□ -1.59
RETP07949 AC135068.5-201ENST00000624197 983 ntBASIC5.13□□□□□ -1.59
RETP07949 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.13□□□□□ -1.59
RETP07949 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.13□□□□□ -1.59
RETP07949 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.13□□□□□ -1.59
RETP07949 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RETP07949 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
RETP07949 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RETP07949 MFSD8-220ENST00000641243 1422 ntBASIC5.13□□□□□ -1.59
RETP07949 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.13□□□□□ -1.59
RETP07949 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.13□□□□□ -1.59
RETP07949 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RETP07949 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RETP07949 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.12□□□□□ -1.59
RETP07949 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
RETP07949 AC083843.3-201ENST00000623679 2186 ntBASIC5.12□□□□□ -1.59
RETP07949 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.12□□□□□ -1.59
RETP07949 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
RETP07949 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.12□□□□□ -1.59
RETP07949 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RETP07949 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RETP07949 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RETP07949 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms