Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.13□□□□□ -1.59
APOEP02649 SLC25A18P1-201ENST00000449385 454 ntBASIC5.13□□□□□ -1.59
APOEP02649 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.13□□□□□ -1.59
APOEP02649 HMGB3P16-201ENST00000508037 287 ntBASIC5.13□□□□□ -1.59
APOEP02649 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.13□□□□□ -1.59
APOEP02649 AC116553.2-201ENST00000564203 463 ntBASIC5.13□□□□□ -1.59
APOEP02649 MIR3934-201ENST00000579806 107 ntBASIC5.13□□□□□ -1.59
APOEP02649 MIR4436B2-201ENST00000581415 91 ntBASIC5.13□□□□□ -1.59
APOEP02649 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.13□□□□□ -1.59
APOEP02649 MIR4436B1-201ENST00000583272 91 ntBASIC5.13□□□□□ -1.59
APOEP02649 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.13□□□□□ -1.59
APOEP02649 RNU6-84P-201ENST00000607737 102 ntBASIC5.13□□□□□ -1.59
APOEP02649 AC087821.1-201ENST00000623639 567 ntBASIC5.13□□□□□ -1.59
APOEP02649 AC027228.2-201ENST00000567141 2154 ntBASIC5.13□□□□□ -1.59
APOEP02649 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
APOEP02649 OR4G1P-202ENST00000641173 1788 ntBASIC5.13□□□□□ -1.59
APOEP02649 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOEP02649 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.13□□□□□ -1.59
APOEP02649 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.13□□□□□ -1.59
APOEP02649 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.13□□□□□ -1.59
APOEP02649 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.13□□□□□ -1.59
APOEP02649 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.12□□□□□ -1.59
APOEP02649 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.12□□□□□ -1.59
APOEP02649 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOEP02649 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOEP02649 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
APOEP02649 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
APOEP02649 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOEP02649 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOEP02649 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
APOEP02649 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.12□□□□□ -1.59
APOEP02649 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.12□□□□□ -1.59
APOEP02649 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.12□□□□□ -1.59
APOEP02649 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOEP02649 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOEP02649 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOEP02649 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.12□□□□□ -1.59
APOEP02649 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.12□□□□□ -1.59
APOEP02649 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.12□□□□□ -1.59
APOEP02649 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
APOEP02649 AL133270.1-201ENST00000402635 279 ntBASIC5.12□□□□□ -1.59
APOEP02649 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.12□□□□□ -1.59
APOEP02649 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.12□□□□□ -1.59
APOEP02649 RPL12P43-201ENST00000420608 499 ntBASIC5.12□□□□□ -1.59
APOEP02649 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.12□□□□□ -1.59
APOEP02649 AL136455.1-201ENST00000441083 1240 ntBASIC5.12□□□□□ -1.59
APOEP02649 OTX2P1-201ENST00000450956 354 ntBASIC5.12□□□□□ -1.59
APOEP02649 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.12□□□□□ -1.59
APOEP02649 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.12□□□□□ -1.59
APOEP02649 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.12□□□□□ -1.59
APOEP02649 RPL7P16-201ENST00000479738 738 ntBASIC5.12□□□□□ -1.59
APOEP02649 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.12□□□□□ -1.59
APOEP02649 MRPS33P2-201ENST00000507850 322 ntBASIC5.12□□□□□ -1.59
APOEP02649 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.12□□□□□ -1.59
APOEP02649 BTF3P13-201ENST00000513224 490 ntBASIC5.12□□□□□ -1.59
APOEP02649 HNRNPRP2-201ENST00000528421 743 ntBASIC5.12□□□□□ -1.59
APOEP02649 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.12□□□□□ -1.59
APOEP02649 AC021006.3-201ENST00000530771 192 ntBASIC5.12□□□□□ -1.59
APOEP02649 OR5D15P-201ENST00000531671 942 ntBASIC5.12□□□□□ -1.59
APOEP02649 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOEP02649 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.12□□□□□ -1.59
APOEP02649 AC087783.2-201ENST00000605070 562 ntBASIC5.12□□□□□ -1.59
APOEP02649 AL445528.2-201ENST00000620582 470 ntBASIC5.12□□□□□ -1.59
APOEP02649 DDX18P6-201ENST00000450119 1997 ntBASIC5.12□□□□□ -1.59
APOEP02649 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOEP02649 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
APOEP02649 AC068446.1-201ENST00000556425 1549 ntBASIC5.12□□□□□ -1.59
APOEP02649 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOEP02649 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.12□□□□□ -1.59
APOEP02649 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.12□□□□□ -1.59
APOEP02649 AL513548.1-201ENST00000562904 1724 ntBASIC5.11□□□□□ -1.59
APOEP02649 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.11□□□□□ -1.59
APOEP02649 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
APOEP02649 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
APOEP02649 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
APOEP02649 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
APOEP02649 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
APOEP02649 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
APOEP02649 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
APOEP02649 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
APOEP02649 GTF2IP5-201ENST00000414608 731 ntBASIC5.11□□□□□ -1.59
APOEP02649 RPS26P13-201ENST00000419030 330 ntBASIC5.11□□□□□ -1.59
APOEP02649 AL590762.4-201ENST00000425885 253 ntBASIC5.11□□□□□ -1.59
APOEP02649 AC093414.1-201ENST00000434712 514 ntBASIC5.11□□□□□ -1.59
APOEP02649 PA2G4P6-201ENST00000438325 1197 ntBASIC5.11□□□□□ -1.59
APOEP02649 SCAND3P1-201ENST00000439854 1060 ntBASIC5.11□□□□□ -1.59
APOEP02649 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
APOEP02649 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
APOEP02649 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.11□□□□□ -1.59
APOEP02649 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.11□□□□□ -1.59
APOEP02649 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
APOEP02649 RPS17P2-201ENST00000461663 408 ntBASIC5.11□□□□□ -1.59
APOEP02649 RPS3AP41-201ENST00000462701 778 ntBASIC5.11□□□□□ -1.59
APOEP02649 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.11□□□□□ -1.59
APOEP02649 GAPDHP56-201ENST00000506031 988 ntBASIC5.11□□□□□ -1.59
APOEP02649 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.11□□□□□ -1.59
APOEP02649 RNA5SP303-201ENST00000516192 130 ntBASIC5.11□□□□□ -1.59
APOEP02649 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.11□□□□□ -1.59
APOEP02649 BRD9P1-201ENST00000529855 560 ntBASIC5.11□□□□□ -1.59
APOEP02649 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms