Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AP000580.1-201ENST00000404439 358 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 U3.35-201ENST00000408405 208 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 U3.36-201ENST00000408418 213 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 RNA5SP345-201ENST00000410646 108 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SCN2BO60939 EIF4A1P1-201ENST00000420241 934 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 AC092162.1-201ENST00000432828 434 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN2BO60939 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 AURKAPS1-201ENST00000451805 1212 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.64□□□□□ -1.67
SCN2BO60939 AC072052.1-201ENST00000496556 306 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.64□□□□□ -1.67
SCN2BO60939 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.64□□□□□ -1.67
SCN2BO60939 COX6B1P5-201ENST00000509843 249 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.64□□□□□ -1.67
SCN2BO60939 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.64□□□□□ -1.67
SCN2BO60939 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN2BO60939 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.64□□□□□ -1.67
SCN2BO60939 AC107918.3-201ENST00000533272 382 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.64□□□□□ -1.67
SCN2BO60939 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.64□□□□□ -1.67
SCN2BO60939 MIR4489-201ENST00000578869 62 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 EIF1P5-201ENST00000585002 234 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN2BO60939 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN2BO60939 IMMP1LP1-201ENST00000605170 488 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN2BO60939 AC023813.4-201ENST00000607580 580 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 MIR6826-201ENST00000617808 98 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.64□□□□□ -1.67
SCN2BO60939 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.64□□□□□ -1.67
SCN2BO60939 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCN2BO60939 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCN2BO60939 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN2BO60939 AL450326.2-201ENST00000421913 1962 ntBASIC4.64□□□□□ -1.67
SCN2BO60939 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN2BO60939 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN2BO60939 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN2BO60939 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SCN2BO60939 AC008758.3-201ENST00000507003 1829 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SCN2BO60939 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SCN2BO60939 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SCN2BO60939 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN2BO60939 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN2BO60939 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SCN2BO60939 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.63□□□□□ -1.67
SCN2BO60939 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
SCN2BO60939 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN2BO60939 AL592291.1-201ENST00000403830 352 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.63□□□□□ -1.67
SCN2BO60939 AL512430.2-201ENST00000406786 339 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 AC098592.2-201ENST00000413158 265 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.63□□□□□ -1.67
SCN2BO60939 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN2BO60939 VN1R31P-201ENST00000417498 730 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.63□□□□□ -1.67
SCN2BO60939 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN2BO60939 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN2BO60939 FAR2P1-206ENST00000449736 709 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 RN7SL172P-201ENST00000460535 303 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 AC008410.1-201ENST00000483777 339 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 RN7SL97P-201ENST00000486780 299 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN2BO60939 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN2BO60939 RN7SKP260-201ENST00000516907 149 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 Y_RNA.719-201ENST00000517156 106 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.63□□□□□ -1.67
SCN2BO60939 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN2BO60939 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.63□□□□□ -1.67
SCN2BO60939 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN2BO60939 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.63□□□□□ -1.67
SCN2BO60939 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.63□□□□□ -1.67
SCN2BO60939 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 AC022467.1-201ENST00000614738 749 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN2BO60939 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN2BO60939 AC006453.5-201ENST00000636451 619 ntBASIC4.63□□□□□ -1.67
SCN2BO60939 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SCN2BO60939 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
SCN2BO60939 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN2BO60939 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN2BO60939 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SCN2BO60939 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCN2BO60939 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SCN2BO60939 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SCN2BO60939 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN2BO60939 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.63□□□□□ -1.67
SCN2BO60939 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCN2BO60939 THAP12P4-201ENST00000528321 2266 ntBASIC4.62□□□□□ -1.67
SCN2BO60939 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.62□□□□□ -1.67
SCN2BO60939 AC093535.2-201ENST00000624769 2326 ntBASIC4.62□□□□□ -1.67
SCN2BO60939 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SCN2BO60939 ZNF733P-202ENST00000444809 1573 ntBASIC4.62□□□□□ -1.67
SCN2BO60939 SNORA51.1-201ENST00000363243 140 ntBASIC4.62□□□□□ -1.67
SCN2BO60939 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SCN2BO60939 OR13C3-201ENST00000374781 1108 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms