Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SSX4O60224 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSX4O60224 AC092681.1-201ENST00000297369 291 ntBASIC4.87□□□□□ -1.63
SSX4O60224 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX4O60224 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX4O60224 RPL21P67-201ENST00000402896 478 ntBASIC4.87□□□□□ -1.63
SSX4O60224 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.87□□□□□ -1.63
SSX4O60224 RNU4-34P-201ENST00000410431 124 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AL357752.1-201ENST00000412817 349 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX4O60224 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.87□□□□□ -1.63
SSX4O60224 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX4O60224 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX4O60224 CYCSP11-201ENST00000436426 315 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX4O60224 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.87□□□□□ -1.63
SSX4O60224 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX4O60224 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.87□□□□□ -1.63
SSX4O60224 CLIC4P1-201ENST00000453177 535 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX4O60224 RPL32P14-201ENST00000463196 378 ntBASIC4.87□□□□□ -1.63
SSX4O60224 RN7SL610P-201ENST00000463845 291 ntBASIC4.87□□□□□ -1.63
SSX4O60224 RN7SL799P-201ENST00000475891 298 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.87□□□□□ -1.63
SSX4O60224 AC073610.1-201ENST00000489971 396 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AL049874.2-201ENST00000492636 288 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AC009120.1-201ENST00000493458 473 ntBASIC4.87□□□□□ -1.63
SSX4O60224 DUTP1-201ENST00000493631 470 ntBASIC4.87□□□□□ -1.63
SSX4O60224 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSX4O60224 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX4O60224 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.87□□□□□ -1.63
SSX4O60224 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.87□□□□□ -1.63
SSX4O60224 AC098976.1-201ENST00000513014 541 ntBASIC4.87□□□□□ -1.63
SSX4O60224 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX4O60224 RN7SKP141-201ENST00000516167 338 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AC013701.1-201ENST00000522657 465 ntBASIC4.87□□□□□ -1.63
SSX4O60224 MRPS16P1-201ENST00000523462 412 ntBASIC4.87□□□□□ -1.63
SSX4O60224 MTND5P21-201ENST00000531961 522 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSX4O60224 AC004825.1-201ENST00000555068 586 ntBASIC4.87□□□□□ -1.63
SSX4O60224 DPPA2P4-201ENST00000563717 878 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AC104072.1-201ENST00000568817 668 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX4O60224 AC008536.1-201ENST00000602872 669 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AL049844.2-201ENST00000604280 628 ntBASIC4.87□□□□□ -1.63
SSX4O60224 BNIP3P31-201ENST00000604515 566 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AC007204.2-201ENST00000615022 616 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AP004607.9-201ENST00000618202 316 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AC005840.5-201ENST00000619166 599 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AL445528.2-201ENST00000620582 470 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AC145207.9-201ENST00000623802 325 ntBASIC4.87□□□□□ -1.63
SSX4O60224 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.87□□□□□ -1.63
SSX4O60224 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.87□□□□□ -1.63
SSX4O60224 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SSX4O60224 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX4O60224 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX4O60224 MTND5P11-201ENST00000511037 1812 ntBASIC4.87□□□□□ -1.63
SSX4O60224 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.87□□□□□ -1.63
SSX4O60224 C4BPAP1-201ENST00000415474 1893 ntBASIC4.87□□□□□ -1.63
SSX4O60224 SMG1P4-204ENST00000523028 4131 ntBASIC4.87□□□□□ -1.63
SSX4O60224 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX4O60224 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SSX4O60224 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.87□□□□□ -1.63
SSX4O60224 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.87□□□□□ -1.63
SSX4O60224 OR4F13P-202ENST00000560066 2054 ntBASIC4.87□□□□□ -1.63
SSX4O60224 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.87□□□□□ -1.63
SSX4O60224 AL450345.1-202ENST00000605741 3881 ntBASIC4.87□□□□□ -1.63
SSX4O60224 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSX4O60224 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX4O60224 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
SSX4O60224 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSX4O60224 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX4O60224 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SSX4O60224 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSX4O60224 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SSX4O60224 RNU6-1005P-201ENST00000384519 107 ntBASIC4.86□□□□□ -1.63
SSX4O60224 AL035405.1-201ENST00000400795 710 ntBASIC4.86□□□□□ -1.63
SSX4O60224 AL355143.1-201ENST00000407101 841 ntBASIC4.86□□□□□ -1.63
SSX4O60224 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.86□□□□□ -1.63
SSX4O60224 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX4O60224 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSX4O60224 DPY19L1P2-201ENST00000426647 915 ntBASIC4.86□□□□□ -1.63
SSX4O60224 MRPL50P1-201ENST00000431951 384 ntBASIC4.86□□□□□ -1.63
SSX4O60224 RPS27P5-201ENST00000444247 244 ntBASIC4.86□□□□□ -1.63
SSX4O60224 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SSX4O60224 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSX4O60224 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX4O60224 AL133244.1-201ENST00000456007 258 ntBASIC4.86□□□□□ -1.63
SSX4O60224 RPS4XP12-201ENST00000461747 709 ntBASIC4.86□□□□□ -1.63
SSX4O60224 RN7SL547P-201ENST00000490793 290 ntBASIC4.86□□□□□ -1.63
SSX4O60224 AC121161.1-201ENST00000510606 652 ntBASIC4.86□□□□□ -1.63
SSX4O60224 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX4O60224 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX4O60224 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX4O60224 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.86□□□□□ -1.63
SSX4O60224 NPM1P35-201ENST00000533043 868 ntBASIC4.86□□□□□ -1.63
SSX4O60224 AC068339.2-201ENST00000534395 618 ntBASIC4.86□□□□□ -1.63
SSX4O60224 AP002373.2-201ENST00000541631 1060 ntBASIC4.86□□□□□ -1.63
SSX4O60224 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX4O60224 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms