Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.02□□□□□ -1.77
SDCBPO00560 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SDCBPO00560 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SDCBPO00560 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SDCBPO00560 IL6STP1-201ENST00000346911 1020 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 U8.4-201ENST00000363626 134 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SDCBPO00560 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.02□□□□□ -1.77
SDCBPO00560 RN7SKP273-201ENST00000411392 314 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 SEPT7P8-201ENST00000413308 775 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 AC093162.1-201ENST00000419682 124 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 OR2AM1P-201ENST00000422137 422 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 AC073850.1-201ENST00000449243 255 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
SDCBPO00560 AC104971.1-201ENST00000495117 578 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 AC140172.1-201ENST00000502928 141 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SDCBPO00560 AC147055.3-201ENST00000510547 851 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.02□□□□□ -1.77
SDCBPO00560 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SDCBPO00560 GSTP1P1-201ENST00000548078 319 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.02□□□□□ -1.77
SDCBPO00560 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SDCBPO00560 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.02□□□□□ -1.77
SDCBPO00560 AP000919.1-201ENST00000582850 985 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.02□□□□□ -1.77
SDCBPO00560 AC130352.1-201ENST00000602979 661 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 MIR6886-201ENST00000619864 61 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 AL359757.1-201ENST00000623176 255 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SDCBPO00560 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.02□□□□□ -1.77
SDCBPO00560 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SDCBPO00560 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SDCBPO00560 AL136164.3-201ENST00000624429 3978 ntBASIC4.02□□□□□ -1.77
SDCBPO00560 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
SDCBPO00560 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SDCBPO00560 AC005332.5-201ENST00000591222 2919 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 HSPA8P18-201ENST00000439846 1928 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDCBPO00560 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDCBPO00560 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDCBPO00560 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDCBPO00560 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.01□□□□□ -1.77
SDCBPO00560 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDCBPO00560 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDCBPO00560 AC000123.3-201ENST00000624029 4975 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDCBPO00560 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.01□□□□□ -1.77
SDCBPO00560 RNU1-106P-201ENST00000384382 164 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 SNORA70-201ENST00000384436 135 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SDCBPO00560 AC092642.1-201ENST00000392417 425 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDCBPO00560 ARL4AP5-201ENST00000404372 599 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 RN7SKP229-201ENST00000410465 302 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 RNA5SP345-201ENST00000410646 108 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 PPIAP13-201ENST00000434706 478 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.01□□□□□ -1.77
SDCBPO00560 PRPF38AP2-201ENST00000438179 851 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.01□□□□□ -1.77
SDCBPO00560 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.01□□□□□ -1.77
SDCBPO00560 EEF1B2P5-201ENST00000444820 548 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 AC005008.1-201ENST00000456151 612 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 snoU13.20-201ENST00000459180 104 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 AC005532.2-201ENST00000467154 373 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 RPSAP50-201ENST00000481955 852 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.01□□□□□ -1.77
SDCBPO00560 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.01□□□□□ -1.77
SDCBPO00560 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.01□□□□□ -1.77
SDCBPO00560 AC011411.1-201ENST00000509592 876 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 HMGB1P19-201ENST00000517578 577 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.01□□□□□ -1.77
SDCBPO00560 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.01□□□□□ -1.77
SDCBPO00560 RPL21P7-201ENST00000557463 483 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.01□□□□□ -1.77
SDCBPO00560 ATP5J2P6-201ENST00000565203 266 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 RN7SL52P-201ENST00000584271 284 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 AC005520.3-201ENST00000602874 370 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 AC026979.4-201ENST00000606555 645 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.01□□□□□ -1.77
SDCBPO00560 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDCBPO00560 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.01□□□□□ -1.77
SDCBPO00560 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.01□□□□□ -1.77
SDCBPO00560 AL596275.2-204ENST00000641628 552 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 AL596275.2-206ENST00000641957 626 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SDCBPO00560 UGT2B26P-201ENST00000508672 1613 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SDCBPO00560 AC015813.6-201ENST00000624409 5808 ntBASIC4.01□□□□□ -1.77
SDCBPO00560 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SDCBPO00560 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SDCBPO00560 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDCBPO00560 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.01□□□□□ -1.77
SDCBPO00560 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SDCBPO00560 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4□□□□□ -1.77
SDCBPO00560 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
SDCBPO00560 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4□□□□□ -1.77
SDCBPO00560 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4□□□□□ -1.77
SDCBPO00560 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms