Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRRM4A7MD48 AL118496.1-201ENST00000440201 1812 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 Z95331.1-201ENST00000623075 23112 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRRM4A7MD48 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRRM4A7MD48 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRRM4A7MD48 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRRM4A7MD48 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRRM4A7MD48 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SRRM4A7MD48 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 SAMMSON-213ENST00000641336 1521 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 MUC2-202ENST00000613187 4845 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 RNA5SP335-201ENST00000363817 110 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 RN7SKP124-201ENST00000364730 341 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AL031985.1-201ENST00000392713 418 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 HSPA8P15-201ENST00000401676 786 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 NCSTNP1-201ENST00000406229 144 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 RPL6P29-201ENST00000414863 865 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 LINC01347-201ENST00000417964 355 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 MTCO3P4-201ENST00000419236 787 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC092570.3-201ENST00000420113 693 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 VN1R42P-201ENST00000424651 344 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC093422.3-201ENST00000428506 305 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC090018.1-201ENST00000434369 367 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC104634.1-201ENST00000452720 462 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 DNAJB5P1-201ENST00000454004 806 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 RNU6-1218P-201ENST00000458990 108 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 RN7SL814P-201ENST00000487715 300 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 TPT1P3-201ENST00000492841 512 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 RNA5SP373-201ENST00000517271 95 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 TMEM97P2-201ENST00000517841 403 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC040958.1-201ENST00000561102 201 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 PRPF19P1-201ENST00000584766 898 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC005252.1-201ENST00000604518 1063 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC104695.2-201ENST00000605056 775 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC015982.1-201ENST00000608113 465 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 MIR8084-201ENST00000614105 89 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AL691477.1-201ENST00000624398 162 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 ADAM5-202ENST00000399789 1942 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 OR9K1P-202ENST00000641111 3217 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC006484.1-201ENST00000435086 1884 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SRRM4A7MD48 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRRM4A7MD48 AC112198.2-201ENST00000426589 6996 ntBASIC4.26□□□□□ -1.73
SRRM4A7MD48 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SRRM4A7MD48 MTND4P31-201ENST00000425607 1343 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC073136.1-201ENST00000449426 2884 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SRRM4A7MD48 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms