Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 Y_RNA.166-201ENST00000363730 102 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 SNORD81.2-201ENST00000365153 76 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 MIR1204-201ENST00000408388 67 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 RNU6-373P-201ENST00000411247 98 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC211486.3-201ENST00000412694 621 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 PPIAP30-201ENST00000415473 519 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC017078.1-201ENST00000416146 368 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC233981.1-201ENST00000423224 461 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC009303.1-201ENST00000426307 352 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AL589872.1-201ENST00000426602 288 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 MTCO2P12-201ENST00000427426 682 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 OR4F13P-201ENST00000428478 931 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 GTF2IP20-201ENST00000431663 360 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AL365400.1-201ENST00000431854 640 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 GTF2F2P2-201ENST00000445825 721 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 CEACAMP5-201ENST00000448037 961 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 BTF3P5-201ENST00000457252 467 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC079193.1-201ENST00000460497 588 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 RPL7P17-201ENST00000470927 724 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC008040.4-201ENST00000494834 768 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC114967.1-201ENST00000504890 259 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 ST13P6-201ENST00000522430 1102 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC243972.3-201ENST00000539655 198 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC090502.2-201ENST00000549267 280 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC078814.3-201ENST00000553036 491 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 MIR3671-201ENST00000580455 88 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC090236.2-201ENST00000587933 1101 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC007687.1-201ENST00000602704 304 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AL355333.1-201ENST00000605632 279 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC090527.3-201ENST00000619041 548 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 YWHAEP7-203ENST00000622054 312 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 CASC19-232ENST00000641480 1244 ntBASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 ZNF33BP1-201ENST00000452497 1834 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 Y_RNA.157-201ENST00000363638 102 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 MRPL42P2-201ENST00000403169 426 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms