Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 HMGB1P48-201ENST00000446155 598 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC103563.5-201ENST00000455643 364 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 RANP2-201ENST00000456833 229 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC023632.1-201ENST00000518463 375 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC044913.1-201ENST00000557200 430 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 NPM1P47-201ENST00000560843 856 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 OR4H6P-201ENST00000563771 921 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 MIR3912-201ENST00000577566 105 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 MIR4666A-201ENST00000580160 79 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC093388.1-201ENST00000609166 430 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC022106.1-201ENST00000612834 766 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 uc_338.9-201ENST00000617424 182 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC074140.1-201ENST00000621617 208 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 OR7A1P-202ENST00000641542 1158 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AL121768.1-201ENST00000613917 2544 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC015689.2-201ENST00000528172 1738 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC020633.1-201ENST00000468439 2247 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 TMSB4XP4-201ENST00000323496 618 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 MIR1203-201ENST00000408812 85 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AL596448.1-201ENST00000415024 392 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AL008987.1-201ENST00000415528 237 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC079355.1-201ENST00000421770 223 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC092651.1-201ENST00000426110 312 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 CYCSP51-201ENST00000443545 318 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AL022237.1-201ENST00000446663 358 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC022431.1-201ENST00000450941 438 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 VPS25P1-201ENST00000455691 508 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 SNX18P26-201ENST00000458433 740 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC007834.2-201ENST00000536310 343 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC092121.1-201ENST00000569452 202 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AL354943.1-201ENST00000572103 781 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC233702.7-202ENST00000582941 211 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 NPIPB1P-202ENST00000588786 828 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 MTND3P19-201ENST00000603825 345 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms