Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC037198.3-201ENST00000616754 526 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 CASC19-264ENST00000641912 1184 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC235565.1-201ENST00000456962 1325 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AC011493.1-201ENST00000596753 1632 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 RN7SKP162-201ENST00000363605 345 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 NPM1P4-201ENST00000414095 812 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 OR2AH1P-201ENST00000425717 928 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 RPS4XP16-201ENST00000427198 791 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 RPS20P1-201ENST00000434853 354 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AC092013.1-201ENST00000438795 332 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 APOOP2-201ENST00000461561 539 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AK4P6-201ENST00000505168 528 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 PGBD4P4-201ENST00000509673 613 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 NPM1P6-201ENST00000521088 871 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 IGKV2-18-201ENST00000522607 343 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AC134349.2-201ENST00000535136 910 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AL512310.9-201ENST00000553311 948 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AGGF1P9-201ENST00000561884 913 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AC012146.2-201ENST00000576545 416 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AC090312.1-201ENST00000580637 348 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AC011445.2-201ENST00000599274 173 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AL008729.2-201ENST00000606393 473 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 AC011447.7-201ENST00000624228 1590 ntBASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.43□□□□□ -1.7
RHBDD3Q9Y3P4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 MIR1182-201ENST00000408363 97 ntBASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 Z95327.2-201ENST00000414579 1873 ntBASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 TRIM60P17-201ENST00000415181 719 ntBASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 RPL34P6-201ENST00000432390 345 ntBASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 NPM1P33-201ENST00000438918 872 ntBASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 ELOCP10-201ENST00000440624 327 ntBASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 AC011225.1-201ENST00000457751 369 ntBASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 LARP7P4-201ENST00000481075 878 ntBASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 AC116553.2-201ENST00000564203 463 ntBASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 ELOCP34-201ENST00000604436 327 ntBASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 AC012213.4-201ENST00000606457 354 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms