Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 HMGB1P41-201ENST00000520234 440 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AF235103.2-201ENST00000525753 346 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 OR52K3P-201ENST00000531655 943 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AC002310.3-201ENST00000569728 723 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AC004908.1-201ENST00000606572 541 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AC012213.2-201ENST00000562917 4597 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AL133268.1-201ENST00000405676 1401 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AC022905.1-201ENST00000503430 3048 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.52□□□□□ -1.04
PDZRN3Q9UPQ7 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
PDZRN3Q9UPQ7 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
PDZRN3Q9UPQ7 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AC079097.1-201ENST00000512187 1399 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 OR9G4-201ENST00000302957 984 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 RNFT1P3-201ENST00000340898 1052 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 Y_RNA.89-201ENST00000363031 102 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 RNU6-1090P-201ENST00000364065 94 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 Y_RNA.573-201ENST00000384763 105 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 MCTS2P-201ENST00000394552 546 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 ATF1P1-201ENST00000406040 927 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 RN7SKP240-201ENST00000410583 375 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 RPS26P4-201ENST00000431743 355 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 FMO7P-201ENST00000436045 768 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 BRK1P2-201ENST00000442875 223 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AC007327.1-201ENST00000447461 264 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 RPS27AP16-201ENST00000492222 470 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 TRIM51DP-201ENST00000529746 596 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AC004817.2-201ENST00000561794 651 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 MIR3171-201ENST00000584270 74 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AC020914.7-201ENST00000594477 545 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 SMIM12P1-201ENST00000603004 274 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AC091768.1-201ENST00000609258 930 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AL589743.6-201ENST00000611025 117 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AC138649.3-201ENST00000622154 254 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 AL354702.2-202ENST00000641481 890 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 OR8G3P-202ENST00000641572 1255 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 NBPF8-201ENST00000583271 5330 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 OR4G11P-202ENST00000642116 1414 ntBASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC8.52□□□□□ -1.05
PDZRN3Q9UPQ7 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms