Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CTNNA3Q9UI47 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CTNNA3Q9UI47 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
CTNNA3Q9UI47 ECM1P2-201ENST00000503354 1577 ntBASIC5.96□□□□□ -1.46
CTNNA3Q9UI47 CASC19-281ENST00000642118 1554 ntBASIC5.96□□□□□ -1.46
CTNNA3Q9UI47 AC083843.2-201ENST00000568248 6253 ntBASIC5.96□□□□□ -1.46
CTNNA3Q9UI47 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CTNNA3Q9UI47 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CTNNA3Q9UI47 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
CTNNA3Q9UI47 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 MAPK10-349ENST00000641767 3661 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 AC010132.2-201ENST00000295493 1043 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 RNU4-4P-201ENST00000364588 130 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 AC013442.1-201ENST00000397347 228 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 MIR1271-201ENST00000408537 86 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 RAB28P1-201ENST00000411517 641 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 AC104333.2-201ENST00000422630 192 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 AL137845.2-201ENST00000444292 988 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 AL691482.1-201ENST00000453255 87 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 AC093166.2-201ENST00000455969 1017 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 RN7SL319P-201ENST00000480656 221 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 NPM1P29-201ENST00000483112 803 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 AGGF1P9-201ENST00000561884 913 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 TVP23CP2-201ENST00000571473 623 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 EIF1P5-201ENST00000585002 234 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 AC005377.1-201ENST00000605126 456 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 AL731566.2-201ENST00000618971 317 ntBASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTNNA3Q9UI47 SAMMSON-213ENST00000641336 1521 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AC083843.3-201ENST00000623679 2186 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 SNORA73.1-201ENST00000363107 205 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AL021331.1-201ENST00000402817 582 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 TPT1P13-201ENST00000449760 499 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 RPS17P2-201ENST00000461663 408 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AC111000.5-201ENST00000506559 1178 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 RNA5SP464-201ENST00000516251 108 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 RPL23AP53-201ENST00000521854 457 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 SETP1-201ENST00000556014 845 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 MIR3934-201ENST00000579806 107 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AL049794.2-201ENST00000616301 365 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AC022106.2-201ENST00000620114 757 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 AL353662.3-201ENST00000625131 237 ntBASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CTNNA3Q9UI47 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.93□□□□□ -1.46
CTNNA3Q9UI47 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms