Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.56□□□□□ -1.68
VAPAQ9P0L0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 MIR621-201ENST00000384919 96 ntBASIC4.56□□□□□ -1.68
VAPAQ9P0L0 MIR143-201ENST00000385300 106 ntBASIC4.56□□□□□ -1.68
VAPAQ9P0L0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 NPM1P4-201ENST00000414095 812 ntBASIC4.56□□□□□ -1.68
VAPAQ9P0L0 BMS1P13-201ENST00000417301 885 ntBASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AC106901.1-201ENST00000425086 698 ntBASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AL451139.1-201ENST00000434718 346 ntBASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AP001804.2-201ENST00000533932 910 ntBASIC4.56□□□□□ -1.68
VAPAQ9P0L0 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AC093249.4-201ENST00000564755 259 ntBASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AC005086.4-201ENST00000623065 213 ntBASIC4.56□□□□□ -1.68
VAPAQ9P0L0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 AC027279.1-201ENST00000568885 4284 ntBASIC4.56□□□□□ -1.68
VAPAQ9P0L0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 KARSP1-201ENST00000451871 1752 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 MTCO1P22-201ENST00000604619 1360 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC108751.5-201ENST00000492880 1336 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 RN7SKP162-201ENST00000363605 345 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 RN7SKP160-201ENST00000363804 340 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 RPL7P57-201ENST00000423238 740 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AL121776.1-201ENST00000429337 372 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AL163193.1-201ENST00000444895 788 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 OR2AO1P-201ENST00000476497 403 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC090142.2-201ENST00000483263 416 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC116562.1-201ENST00000485355 781 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC090568.1-201ENST00000509499 856 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC018442.3-201ENST00000523025 183 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 DUX4L52-201ENST00000549363 777 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 MIR4691-201ENST00000583764 85 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC011447.4-201ENST00000587562 111 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 VN1R81P-201ENST00000602085 372 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC130352.1-201ENST00000602979 661 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 MAPK10-320ENST00000641462 6696 ntBASIC4.55□□□□□ -1.68
VAPAQ9P0L0 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms