Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC007485.2-201ENST00000623493 1667 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 PPIAP22-201ENST00000358455 498 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 RNA5SP238-201ENST00000365464 120 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 RNU6-639P-201ENST00000384074 107 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 Y_RNA.452-201ENST00000384202 108 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 RNU6-474P-201ENST00000384243 107 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 RN7SKP29-201ENST00000410957 272 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 RN7SKP108-201ENST00000411367 328 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 BX295541.1-201ENST00000417774 250 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AL593856.1-201ENST00000419949 805 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 PIGFP2-201ENST00000421400 651 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC007394.1-201ENST00000421941 531 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AL592293.2-201ENST00000422292 996 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 VDAC2P3-201ENST00000430995 828 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC244505.2-201ENST00000435089 759 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC027124.1-201ENST00000440852 466 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AL512605.1-202ENST00000441919 381 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 FUNDC2P2-202ENST00000443452 493 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 SUMO1P2-201ENST00000452524 304 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 WBP1LP1-201ENST00000460451 896 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 OR9A1P-202ENST00000484361 945 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC007182.2-201ENST00000489251 402 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 EIF4A2P5-201ENST00000529914 499 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 HMGB1P42-201ENST00000532126 553 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 NF1P12-201ENST00000549593 583 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 GTF2IP8-201ENST00000560687 584 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 MIR5697-201ENST00000578045 78 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 MIR3682-201ENST00000581338 84 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 DYNLL1P1-201ENST00000595442 269 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC008638.3-201ENST00000603341 463 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AL596327.1-201ENST00000603629 213 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC011453.2-201ENST00000603737 729 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AP001554.1-201ENST00000604533 376 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC093788.1-201ENST00000609356 927 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 RMST_3.1-201ENST00000611651 109 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AL590065.1-201ENST00000603371 4774 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC011155.1-201ENST00000316512 456 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 RNU6-451P-201ENST00000362921 107 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 RNA5SP396-201ENST00000364834 120 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 PEX12P1-201ENST00000400284 1048 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 MRPL32P1-201ENST00000406301 247 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AL356967.1-201ENST00000406305 431 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 SNORA3.1-201ENST00000408166 111 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 RN7SKP221-201ENST00000410420 301 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 RNU6-373P-201ENST00000411247 98 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 EEF1GP7-201ENST00000422983 703 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 MTCO3P46-201ENST00000425787 232 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 BLOC1S2P1-201ENST00000428431 301 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 RPL37P21-201ENST00000435890 276 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms