Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 FAM96AP1-201ENST00000430879 482 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AC092162.1-201ENST00000432828 434 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AC069285.2-201ENST00000440210 275 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 FGF7P3-201ENST00000454645 303 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AC092349.1-201ENST00000504903 310 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 UGT2A3P7-201ENST00000510485 734 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 ACTR6P1-201ENST00000514311 1104 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AC020915.5-201ENST00000596836 964 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 BX322635.1-201ENST00000605804 496 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 MIR7109-201ENST00000613748 65 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 MIR8080-201ENST00000622224 89 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CCDC28BQ9BUN5 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC28BQ9BUN5 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 RNA5SP132-201ENST00000364725 118 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 MIR600-201ENST00000385007 98 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 SNORA68.2-201ENST00000391263 128 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC007068.1-201ENST00000396690 844 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 BX323845.1-201ENST00000432417 179 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 OTX2P1-201ENST00000450956 354 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 MTND2P3-201ENST00000452458 470 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 MTND3P4-201ENST00000453537 303 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 RPL35AP19-201ENST00000469425 329 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 SEPT7P6-201ENST00000469999 1143 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 RN7SL41P-201ENST00000476144 297 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC025445.1-201ENST00000502728 300 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 SNORA70.17-201ENST00000516449 133 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC012339.2-201ENST00000523996 453 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC069240.1-201ENST00000548774 375 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC126177.5-201ENST00000549599 178 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AL137072.1-201ENST00000603444 466 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 FO393422.1-201ENST00000603908 708 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC087783.2-201ENST00000605070 562 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC006213.5-201ENST00000619673 288 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC005086.4-201ENST00000623065 213 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 SAMMSON-209ENST00000641222 1100 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 AC027279.1-201ENST00000568885 4284 ntBASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC28BQ9BUN5 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 RNU1-83P-201ENST00000363426 164 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 RNU6-819P-201ENST00000364116 107 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 SNORA66-201ENST00000384792 133 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 GAPDHP15-201ENST00000398586 975 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AL391422.1-201ENST00000402155 436 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 RGS17P1-201ENST00000423358 553 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 TRIM60P13-201ENST00000432350 1283 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC012075.1-201ENST00000436549 580 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms