Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
PHOX2BQ99453 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
PHOX2BQ99453 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
PHOX2BQ99453 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.74□□□□□ -1.17
PHOX2BQ99453 SOCS5P5-201ENST00000402732 1586 ntBASIC7.74□□□□□ -1.17
PHOX2BQ99453 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
PHOX2BQ99453 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
PHOX2BQ99453 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
PHOX2BQ99453 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
PHOX2BQ99453 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
PHOX2BQ99453 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.74□□□□□ -1.17
PHOX2BQ99453 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
PHOX2BQ99453 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
PHOX2BQ99453 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
PHOX2BQ99453 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
PHOX2BQ99453 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
PHOX2BQ99453 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
PHOX2BQ99453 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
PHOX2BQ99453 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
PHOX2BQ99453 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 ASAP1-IT2-201ENST00000626977 2031 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 AC011155.1-201ENST00000316512 456 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 RNU6-1309P-201ENST00000363305 108 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 RN7SKP44-201ENST00000363602 316 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 RNA5SP260-201ENST00000363849 111 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 RN7SKP250-201ENST00000363924 321 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 RNU6-996P-201ENST00000365438 107 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 RNU4-26P-201ENST00000410270 107 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 ERLEC1P1-201ENST00000433806 578 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 TCEA1P1-201ENST00000449716 880 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 CACYBPP2-201ENST00000453625 678 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 AC099670.1-201ENST00000455141 783 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 RPS20P32-201ENST00000456044 356 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 AL122013.1-201ENST00000473054 801 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 RPS4XP18-201ENST00000495480 763 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 AC005741.1-201ENST00000511094 432 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 AC100823.2-201ENST00000518337 699 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 MIR3149-201ENST00000584629 83 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 BBIP1P1-201ENST00000602999 279 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 CTHRC1P1-201ENST00000605383 469 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 AC122710.3-201ENST00000606566 541 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 MIR6798-201ENST00000612887 67 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 AC087588.2-201ENST00000617667 426 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 AC010332.1-201ENST00000620439 97 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 AL031123.2-201ENST00000563225 3325 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHOX2BQ99453 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 TARS2P1-201ENST00000506124 2041 ntBASIC7.73□□□□□ -1.17
PHOX2BQ99453 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
PHOX2BQ99453 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 CASC19-204ENST00000641001 2055 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms