Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU4-68P-201ENST00000364314 141 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 RN7SKP78-201ENST00000364711 318 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU1-59P-201ENST00000364829 162 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU6-207P-201ENST00000384137 107 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 ZNF603P-201ENST00000405613 487 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 RN7SKP293-201ENST00000411389 296 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 ELOCP17-201ENST00000414751 326 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC127526.2-201ENST00000426436 775 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC064862.4-201ENST00000442180 334 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AL671855.1-201ENST00000446875 1203 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC027673.1-201ENST00000456245 405 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 RPS27AP2-201ENST00000457576 465 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC093899.1-201ENST00000457984 376 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC008379.1-201ENST00000463655 464 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 UBFD1P1-201ENST00000473259 814 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC138409.2-202ENST00000507274 458 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 snoU109.5-201ENST00000516231 132 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 MTND4LP26-201ENST00000518144 282 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC112191.2-201ENST00000522428 333 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 MTND3P19-201ENST00000603825 345 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 Z82195.1-201ENST00000604558 398 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 RN7SKP299-201ENST00000606679 301 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AL021707.7-201ENST00000607991 416 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 OR7M1P-201ENST00000608946 533 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 TUSC7.1-201ENST00000610969 165 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 U1.25-201ENST00000614085 162 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC090607.5-201ENST00000615692 224 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AP005431.1-201ENST00000618479 319 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 U1.34-201ENST00000618578 162 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 U1.31-201ENST00000620022 160 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC090897.3-201ENST00000636973 1157 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 MTND4P29-201ENST00000503122 1372 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC005224.3-201ENST00000584683 2140 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AC232271.1-201ENST00000602455 2715 ntBASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 NLRP3P1-201ENST00000622303 1785 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 MSL3P1-202ENST00000440028 1468 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 MTND4P31-201ENST00000425607 1343 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 RNF19BPY-201ENST00000458209 1550 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 Y_RNA.3-201ENST00000362331 103 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 RNA5SP46-201ENST00000362370 120 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU6-1283P-201ENST00000365314 105 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 RN7SKP81-201ENST00000365603 331 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU6-481P-201ENST00000384194 107 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 RPS3AP26-201ENST00000398259 784 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 FCF1P5-201ENST00000406490 482 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC105402.1-201ENST00000413336 545 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC092393.1-201ENST00000439625 742 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 FRG2FP-204ENST00000453982 852 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 SLC25A51P1-201ENST00000468432 871 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC011037.1-201ENST00000483964 558 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC034244.1-201ENST00000507687 207 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC105384.2-201ENST00000508433 640 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC109481.1-201ENST00000509173 282 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms