Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC011626.1-201ENST00000604710 562 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AL158163.1-201ENST00000603915 1649 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 RN7SKP185-201ENST00000362813 326 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 Z92545.1-201ENST00000411782 234 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 NPM1P41-201ENST00000512920 831 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 OR8Q1P-201ENST00000526467 655 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 MTCYBP13-201ENST00000578634 1093 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC073137.1-201ENST00000605636 634 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC140479.6-201ENST00000633535 357 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC000095.2-202ENST00000637415 154 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 MAPK6PS2-201ENST00000379571 2060 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 CYCSP32-201ENST00000440548 321 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AL133547.1-201ENST00000448546 220 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 RPS24P16-201ENST00000497294 392 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AP005205.1-201ENST00000563503 508 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AL357559.1-201ENST00000622228 274 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 UG0898H09-202ENST00000623646 7040 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AC120036.2-201ENST00000509729 1474 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 ZNF566-204ENST00000434377 5197 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 ZNF137P-201ENST00000456718 1920 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AC092162.3-201ENST00000624511 1624 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 RNA5SP432-201ENST00000362480 116 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 RNA5SP130-201ENST00000364431 114 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AC099670.2-201ENST00000435130 321 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AL450023.3-201ENST00000440592 271 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AC005412.2-201ENST00000492004 341 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AL139124.1-201ENST00000609123 421 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 USP45-204ENST00000369233 2514 ntTSL 5 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 AC092709.1-201ENST00000521355 1045 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 RN7SL652P-201ENST00000577769 300 ntBASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC3.91□□□□□ -1.78
CSMD1Q96PZ7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 MIR183-201ENST00000384958 110 ntBASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 MRPS21P3-201ENST00000436696 262 ntBASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 RPL7P41-201ENST00000485823 957 ntBASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC3.9□□□□□ -1.78
CSMD1Q96PZ7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms