Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC010735.1-201ENST00000567305 1026 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC091057.3-201ENST00000602684 733 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC023762.1-201ENST00000603280 584 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AP004607.9-201ENST00000618202 316 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC006927.2-201ENST00000639256 389 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC007342.5-201ENST00000571340 2142 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AL603750.1-201ENST00000624216 1717 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AC003973.3-201ENST00000624863 2822 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 SNORD56.4-201ENST00000363883 71 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 RNU6-729P-201ENST00000384399 107 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 SNORA48.4-201ENST00000391089 134 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 GAPDHP15-201ENST00000398586 975 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 HMGB1P13-201ENST00000406019 642 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 RNU2-22P-201ENST00000411266 212 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 VN1R51P-201ENST00000411675 945 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AL355433.1-201ENST00000422804 300 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AC044797.1-201ENST00000445744 679 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AZGP1P2-201ENST00000454506 345 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 RPL21P18-201ENST00000469899 480 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AC100832.1-201ENST00000471945 383 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AC108693.1-201ENST00000496068 432 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 TRAV31-201ENST00000502780 342 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 FTH1P11-201ENST00000517577 551 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AC010376.1-201ENST00000522101 334 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AC023825.1-201ENST00000566704 1030 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 FKBP1AP1-201ENST00000594588 318 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 Z95327.3-201ENST00000610385 572 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 VN1R9P-201ENST00000614184 867 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AL162574.1-201ENST00000615702 950 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 AC136428.4-201ENST00000634254 1155 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 CASC19-248ENST00000641674 1356 ntBASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHMP4CQ96CF2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 MFSD8-213ENST00000641134 1327 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 ABCC13-202ENST00000463099 3842 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 RN7SKP145-201ENST00000363291 303 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 MIR137-201ENST00000385223 102 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AL034374.1-201ENST00000406329 351 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AC106883.1-201ENST00000418805 562 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AC115285.1-201ENST00000424879 736 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AC005189.1-201ENST00000431286 310 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 CYCSP6-201ENST00000434498 302 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 NDUFB4P8-201ENST00000435351 367 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AC069306.1-201ENST00000507006 843 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 IGKV2-18-201ENST00000522607 343 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 OR7E13P-201ENST00000526052 910 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AC079064.1-201ENST00000528365 362 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AP003717.3-201ENST00000544832 1180 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms