Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 PRPF38AP1-201ENST00000451976 933 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 VDAC2P4-201ENST00000452925 711 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 OR52A4P-201ENST00000472867 958 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 RPS12P31-201ENST00000491419 398 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 AC109464.1-201ENST00000511091 819 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 AC004923.2-201ENST00000529649 369 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTP4A1Q93096 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTP4A1Q93096 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 AC233266.2-201ENST00000567067 528 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 HNRNPCP4-201ENST00000571636 900 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 AP005431.1-201ENST00000618479 319 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 AP003400.3-201ENST00000624904 346 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 CR392039.4-201ENST00000624968 501 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTP4A1Q93096 CASC19-222ENST00000641321 1173 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 OR2L1P-202ENST00000641567 1023 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTP4A1Q93096 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 AL592437.2-201ENST00000421655 2434 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTP4A1Q93096 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTP4A1Q93096 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTP4A1Q93096 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AL049555.1-201ENST00000562834 1933 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTP4A1Q93096 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTP4A1Q93096 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTP4A1Q93096 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTP4A1Q93096 RNA5SP46-201ENST00000362370 120 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTP4A1Q93096 RNA5SP284-201ENST00000384547 118 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 MIR142-201ENST00000384835 87 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 DBIP1-201ENST00000401435 260 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 AL356057.1-202ENST00000402263 756 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 RPL12P9-201ENST00000412942 488 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 MTND4P11-201ENST00000417020 1058 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC012519.1-201ENST00000424588 610 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 AKR1B10P1-201ENST00000425765 942 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 AL662874.1-201ENST00000426065 230 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AL353093.1-201ENST00000441292 436 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 EEF1A1P1-201ENST00000447052 739 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 RPL31P15-201ENST00000449770 338 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 NIP7P2-201ENST00000485801 544 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AL049874.2-201ENST00000492636 288 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC090568.1-201ENST00000509499 856 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC013701.1-201ENST00000522657 465 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC090022.1-201ENST00000546569 311 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AL731537.2-201ENST00000561565 951 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC127024.5-201ENST00000580085 462 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC040174.2-201ENST00000602701 465 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms