Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.39□□□□□ -1.39
ERCC4Q92889 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.39□□□□□ -1.39
ERCC4Q92889 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.39□□□□□ -1.39
ERCC4Q92889 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 OR9K1P-202ENST00000641111 3217 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 AC104966.1-201ENST00000467010 1464 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
ERCC4Q92889 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.38□□□□□ -1.39
ERCC4Q92889 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.38□□□□□ -1.39
ERCC4Q92889 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
ERCC4Q92889 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ERCC4Q92889 AL159987.1-201ENST00000347911 293 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 RNU6-1214P-201ENST00000363650 109 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 RNU4-51P-201ENST00000364206 140 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 Y_RNA.318-201ENST00000365131 97 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC4Q92889 U6.112-201ENST00000384129 70 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 AC016739.1-201ENST00000405359 345 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.38□□□□□ -1.39
ERCC4Q92889 RPSAP35-201ENST00000413753 818 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 RNGTTP1-201ENST00000420965 728 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 VN1R21P-201ENST00000426703 765 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 AC069154.1-201ENST00000432914 542 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC4Q92889 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC4Q92889 AC023271.1-201ENST00000445936 1090 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 AL157827.1-201ENST00000447622 132 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 TRY2P-201ENST00000448860 689 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 HMGB1P5-202ENST00000451497 985 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 ART2BP-201ENST00000453501 499 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 SEPT7P3-201ENST00000455017 621 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 AC009963.3-201ENST00000458090 486 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 AC023194.2-201ENST00000465398 406 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
ERCC4Q92889 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC4Q92889 AP002884.1-201ENST00000479691 655 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 BET1P1-201ENST00000482276 359 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.38□□□□□ -1.39
ERCC4Q92889 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.38□□□□□ -1.39
ERCC4Q92889 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC4Q92889 AC074087.1-201ENST00000512059 724 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.38□□□□□ -1.39
ERCC4Q92889 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.38□□□□□ -1.39
ERCC4Q92889 PCNAP4-201ENST00000532690 730 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.38□□□□□ -1.39
ERCC4Q92889 RPA2P1-201ENST00000556557 721 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC4Q92889 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC4Q92889 AC012254.4-201ENST00000588843 273 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC6.38□□□□□ -1.39
ERCC4Q92889 Z99497.2-201ENST00000603634 310 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 MIR6071-201ENST00000616741 78 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.38□□□□□ -1.39
ERCC4Q92889 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.38□□□□□ -1.39
ERCC4Q92889 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.38□□□□□ -1.39
ERCC4Q92889 NEPNP-201ENST00000404786 1371 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 IFIT1P1-201ENST00000400497 1449 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 ZNF876P-202ENST00000398732 1485 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.38□□□□□ -1.39
ERCC4Q92889 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
ERCC4Q92889 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.38□□□□□ -1.39
ERCC4Q92889 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 AC027088.4-201ENST00000611559 1947 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.38□□□□□ -1.39
ERCC4Q92889 PWAR1-201ENST00000624188 2414 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.38□□□□□ -1.39
ERCC4Q92889 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.38□□□□□ -1.39
ERCC4Q92889 AL034546.1-201ENST00000623740 3693 ntBASIC6.38□□□□□ -1.39
ERCC4Q92889 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC4Q92889 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 LYARP1-201ENST00000436977 1501 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.37□□□□□ -1.39
ERCC4Q92889 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.37□□□□□ -1.39
ERCC4Q92889 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.37□□□□□ -1.39
ERCC4Q92889 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ERCC4Q92889 AL121886.1-201ENST00000358609 435 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms