Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC034236.1-201ENST00000469891 373 ntBASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 CR383656.1-201ENST00000484916 377 ntBASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 AC010857.1-201ENST00000606398 594 ntBASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 MLECP1-201ENST00000615893 709 ntBASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 DHX40P1-201ENST00000588725 1412 ntBASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 AC018628.1-201ENST00000624147 3819 ntBASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 RN7SKP114-201ENST00000410327 279 ntBASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 NRBF2P2-201ENST00000413087 861 ntBASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 EIF4A1P1-201ENST00000420241 934 ntBASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 RPS26P4-201ENST00000431743 355 ntBASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 KCTD10P1-201ENST00000434203 625 ntBASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 AC092490.3-201ENST00000545370 572 ntBASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.96□□□□□ -1.61
SHROOM3Q8TF72 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 AC139713.2-214ENST00000642059 1811 ntBASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 NCLP2-201ENST00000416078 1462 ntBASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 AC104118.1-201ENST00000607625 1589 ntBASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 EIF4HP2-201ENST00000424380 563 ntBASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 RPL18P10-201ENST00000425606 538 ntBASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 MIR4284-201ENST00000578924 81 ntBASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 AC091042.1-201ENST00000579213 173 ntBASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 TET1P1-201ENST00000426627 2301 ntBASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 AL442639.1-201ENST00000625030 1899 ntBASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHROOM3Q8TF72 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AC000374.1-201ENST00000434698 1745 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 MIPEPP2-201ENST00000422560 1819 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 RN7SKP263-201ENST00000411194 309 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 GJA6P-201ENST00000415117 1042 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AC119751.6-201ENST00000416712 186 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AC073143.1-201ENST00000436316 395 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 CYCSP11-201ENST00000436426 315 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AURKAPS2-201ENST00000454983 333 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 RNA5SP303-201ENST00000516192 130 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AC005868.1-201ENST00000536421 331 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AP001880.2-201ENST00000538233 448 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AC093249.4-201ENST00000564755 259 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 OR52H1-202ENST00000641796 1061 ntBASIC4.95□□□□□ -1.62
SHROOM3Q8TF72 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms