Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
DTX3Q8N9I9 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
DTX3Q8N9I9 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.7□□□□□ -1.5
DTX3Q8N9I9 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DTX3Q8N9I9 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DTX3Q8N9I9 DCAF13P3-201ENST00000561147 1334 ntBASIC5.7□□□□□ -1.5
DTX3Q8N9I9 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.7□□□□□ -1.5
DTX3Q8N9I9 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
DTX3Q8N9I9 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DTX3Q8N9I9 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
DTX3Q8N9I9 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.7□□□□□ -1.5
DTX3Q8N9I9 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 ICE2P1-201ENST00000512800 1849 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 HSPD1P1-201ENST00000503199 1726 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 VN1R12P-201ENST00000403778 876 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 MIR548F1-201ENST00000408667 84 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 RPS26P38-201ENST00000414476 348 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 FNDC3CP-201ENST00000420795 1155 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 RPS25P9-201ENST00000435591 252 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AC093155.1-201ENST00000440164 826 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 RPL23AP28-201ENST00000448062 470 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 SSXP1-201ENST00000453640 473 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 RNA5SP269-201ENST00000459032 137 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 RN7SL552P-201ENST00000462094 276 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AC021205.1-201ENST00000468797 348 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 RPS7P6-201ENST00000485777 579 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AC111193.1-201ENST00000504097 155 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 ARL2BPP4-201ENST00000506854 471 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AC083906.1-201ENST00000509298 406 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AC093281.2-201ENST00000510153 597 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 MINOS1P4-201ENST00000515470 318 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 NPM1P6-201ENST00000521088 871 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AC007494.1-201ENST00000562293 760 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AC092032.1-201ENST00000603090 165 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AC087894.3-201ENST00000623682 349 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 AL512353.3-201ENST00000417517 1326 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.69□□□□□ -1.5
DTX3Q8N9I9 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.69□□□□□ -1.5
DTX3Q8N9I9 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
DTX3Q8N9I9 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DTX3Q8N9I9 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.68□□□□□ -1.5
DTX3Q8N9I9 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DTX3Q8N9I9 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DTX3Q8N9I9 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
DTX3Q8N9I9 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms