Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CNOT7P1-201ENST00000429006 852 ntBASIC7.28□□□□□ -1.24
VPS8Q8N3P4 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 AC012512.1-201ENST00000446594 718 ntBASIC7.28□□□□□ -1.24
VPS8Q8N3P4 AL935212.3-201ENST00000450729 284 ntBASIC7.28□□□□□ -1.24
VPS8Q8N3P4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 PPP1R11P1-201ENST00000486095 376 ntBASIC7.28□□□□□ -1.24
VPS8Q8N3P4 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 HMGB3P16-201ENST00000508037 287 ntBASIC7.28□□□□□ -1.24
VPS8Q8N3P4 RNA5SP249-201ENST00000516127 99 ntBASIC7.28□□□□□ -1.24
VPS8Q8N3P4 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 MIR4715-201ENST00000584117 79 ntBASIC7.28□□□□□ -1.24
VPS8Q8N3P4 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 AC130352.1-201ENST00000602979 661 ntBASIC7.28□□□□□ -1.24
VPS8Q8N3P4 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 AL359922.3-201ENST00000624779 1670 ntBASIC7.28□□□□□ -1.24
VPS8Q8N3P4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 OR51H2P-202ENST00000641424 3046 ntBASIC7.28□□□□□ -1.24
VPS8Q8N3P4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC7.27□□□□□ -1.24
VPS8Q8N3P4 RPL21P43-201ENST00000425440 472 ntBASIC7.27□□□□□ -1.24
VPS8Q8N3P4 NMNAT1P2-201ENST00000435192 860 ntBASIC7.27□□□□□ -1.24
VPS8Q8N3P4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC7.27□□□□□ -1.24
VPS8Q8N3P4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC7.27□□□□□ -1.24
VPS8Q8N3P4 MRPL48P1-201ENST00000445390 636 ntBASIC7.27□□□□□ -1.24
VPS8Q8N3P4 AC093720.1-201ENST00000505681 714 ntBASIC7.27□□□□□ -1.24
VPS8Q8N3P4 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC7.27□□□□□ -1.24
VPS8Q8N3P4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC7.27□□□□□ -1.24
VPS8Q8N3P4 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
VPS8Q8N3P4 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC7.27□□□□□ -1.24
VPS8Q8N3P4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.27□□□□□ -1.24
VPS8Q8N3P4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VPS8Q8N3P4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
VPS8Q8N3P4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
VPS8Q8N3P4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
VPS8Q8N3P4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
VPS8Q8N3P4 AC018628.1-201ENST00000624147 3819 ntBASIC7.27□□□□□ -1.25
VPS8Q8N3P4 AC018765.1-201ENST00000623357 3446 ntBASIC7.27□□□□□ -1.25
VPS8Q8N3P4 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.27□□□□□ -1.25
VPS8Q8N3P4 AP000432.2-201ENST00000624164 2048 ntBASIC7.27□□□□□ -1.25
VPS8Q8N3P4 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC7.27□□□□□ -1.25
VPS8Q8N3P4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC7.27□□□□□ -1.25
VPS8Q8N3P4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VPS8Q8N3P4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC7.27□□□□□ -1.25
VPS8Q8N3P4 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.27□□□□□ -1.25
VPS8Q8N3P4 AC090181.2-201ENST00000602975 672 ntBASIC7.27□□□□□ -1.25
VPS8Q8N3P4 AL359757.1-201ENST00000623176 255 ntBASIC7.27□□□□□ -1.25
VPS8Q8N3P4 AC009120.7-201ENST00000623452 780 ntBASIC7.27□□□□□ -1.25
VPS8Q8N3P4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
VPS8Q8N3P4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
VPS8Q8N3P4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.26□□□□□ -1.25
VPS8Q8N3P4 SAMMSON-210ENST00000641260 1308 ntBASIC7.26□□□□□ -1.25
VPS8Q8N3P4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VPS8Q8N3P4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC7.26□□□□□ -1.25
VPS8Q8N3P4 FABP12P1-201ENST00000401911 322 ntBASIC7.26□□□□□ -1.25
VPS8Q8N3P4 OR2AH1P-201ENST00000425717 928 ntBASIC7.26□□□□□ -1.25
VPS8Q8N3P4 AC004938.1-201ENST00000438468 308 ntBASIC7.26□□□□□ -1.25
VPS8Q8N3P4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.26□□□□□ -1.25
VPS8Q8N3P4 NIP7P2-201ENST00000485801 544 ntBASIC7.26□□□□□ -1.25
VPS8Q8N3P4 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC7.26□□□□□ -1.25
VPS8Q8N3P4 NPM1P28-201ENST00000492269 840 ntBASIC7.26□□□□□ -1.25
VPS8Q8N3P4 RNA5SP303-201ENST00000516192 130 ntBASIC7.26□□□□□ -1.25
VPS8Q8N3P4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.26□□□□□ -1.25
VPS8Q8N3P4 AC068831.4-201ENST00000556118 109 ntBASIC7.26□□□□□ -1.25
VPS8Q8N3P4 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.26□□□□□ -1.25
VPS8Q8N3P4 AC020915.5-201ENST00000596836 964 ntBASIC7.26□□□□□ -1.25
VPS8Q8N3P4 AC012409.3-201ENST00000611343 981 ntBASIC7.26□□□□□ -1.25
VPS8Q8N3P4 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 OR1F12-201ENST00000402365 945 ntBASIC7.25□□□□□ -1.25
VPS8Q8N3P4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 LSM3P2-201ENST00000551246 273 ntBASIC7.25□□□□□ -1.25
VPS8Q8N3P4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 AC023762.1-201ENST00000603280 584 ntBASIC7.25□□□□□ -1.25
VPS8Q8N3P4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
VPS8Q8N3P4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC7.24□□□□□ -1.25
VPS8Q8N3P4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
VPS8Q8N3P4 CPHL1P-201ENST00000461341 3407 ntBASIC7.24□□□□□ -1.25
VPS8Q8N3P4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VPS8Q8N3P4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms