Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PPM1AP1-201ENST00000502740 1135 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 NDUFB4P12-201ENST00000513465 390 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AP002981.1-201ENST00000517692 975 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AC027308.1-201ENST00000517993 110 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AL049779.2-201ENST00000553847 315 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 MIR6837-201ENST00000620884 64 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AC136428.4-201ENST00000634254 1155 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC090971.4-201ENST00000560291 1800 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC011493.1-201ENST00000596753 1632 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC027279.1-201ENST00000568885 4284 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC235565.1-201ENST00000456962 1325 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 RNU6-984P-201ENST00000363236 109 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 RPL35AP24-201ENST00000413846 330 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC009237.10-201ENST00000414112 510 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC108075.1-201ENST00000424692 529 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC106901.1-201ENST00000425086 698 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC079807.1-201ENST00000429993 481 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 SPRYD7P1-201ENST00000443861 570 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 RPL7P6-201ENST00000480903 738 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC020890.1-201ENST00000491837 504 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC020978.7-201ENST00000575953 1187 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 IMMP1LP3-201ENST00000604197 224 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC007390.2-201ENST00000606229 3803 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AP005131.7-201ENST00000610087 611 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AL356752.1-201ENST00000615844 593 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AL049767.1-202ENST00000637826 242 ntBASIC3.81□□□□□ -1.8
HIST1H1AQ02539 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H1AQ02539 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AC107021.2-201ENST00000567714 2095 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 ASNSP1-201ENST00000518311 1939 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AL353625.1-202ENST00000366273 571 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 MIR143-201ENST00000385300 106 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 SNORA11.5-201ENST00000408163 128 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 OR3A2-201ENST00000408891 1076 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 RN7SKP126-201ENST00000411143 300 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 EIF4EP1-201ENST00000422311 642 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 EI24P4-201ENST00000423683 1078 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 RPS4XP16-201ENST00000427198 791 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AL357520.1-201ENST00000441557 453 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AC133473.1-201ENST00000455173 299 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AC009127.1-201ENST00000467090 155 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 RPL7P51-201ENST00000490532 749 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 DEFB109F-201ENST00000491870 277 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AC108693.1-201ENST00000496068 432 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 PGBD4P4-201ENST00000509673 613 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 MYL12AP1-201ENST00000518490 515 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms