Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.45□□□□□ -1.7
CX3CL1P78423 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 GAPDHP24-201ENST00000328713 983 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 RNA5SP131-201ENST00000365452 119 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 RN7SKP292-201ENST00000365522 317 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.45□□□□□ -1.7
CX3CL1P78423 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.45□□□□□ -1.7
CX3CL1P78423 RNU6-98P-201ENST00000384173 107 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AL009179.1-201ENST00000406085 265 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AC093155.2-201ENST00000420734 937 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AC113412.1-201ENST00000425840 504 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 FTH1P16-201ENST00000435241 552 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 RPL23AP19-201ENST00000436229 369 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 RPL7P29-201ENST00000437151 728 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AL359265.1-201ENST00000440296 795 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 TCEA1P3-201ENST00000443005 880 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 ARL5AP2-201ENST00000444698 533 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AC073109.1-201ENST00000445066 978 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AL450996.1-201ENST00000445574 1202 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AL596266.1-201ENST00000448132 400 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 HMGB1P4-201ENST00000455362 567 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.45□□□□□ -1.7
CX3CL1P78423 COX6B1P2-201ENST00000489624 230 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 RPS27AP18-201ENST00000515536 459 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 RN7SKP253-201ENST00000516424 309 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AC118942.1-201ENST00000529674 1035 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AC090888.3-201ENST00000558917 509 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 H3F3BP2-201ENST00000583907 357 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AC069431.2-201ENST00000604149 1099 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AP002802.2-201ENST00000605877 235 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AC018754.1-201ENST00000607486 925 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AC015982.1-201ENST00000608113 465 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.45□□□□□ -1.7
CX3CL1P78423 uc_338.9-201ENST00000617424 182 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.45□□□□□ -1.7
CX3CL1P78423 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AC006840.1-201ENST00000623069 542 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.45□□□□□ -1.7
CX3CL1P78423 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.45□□□□□ -1.7
CX3CL1P78423 AL627171.1-201ENST00000618845 1308 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 AC011755.1-201ENST00000623763 2049 ntBASIC4.45□□□□□ -1.7
CX3CL1P78423 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CX3CL1P78423 ZNF849P-201ENST00000594711 1566 ntBASIC4.44□□□□□ -1.7
CX3CL1P78423 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CX3CL1P78423 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.44□□□□□ -1.7
CX3CL1P78423 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CX3CL1P78423 ABCC13-202ENST00000463099 3842 ntBASIC4.44□□□□□ -1.7
CX3CL1P78423 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CX3CL1P78423 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
CX3CL1P78423 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CX3CL1P78423 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
CX3CL1P78423 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CX3CL1P78423 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CX3CL1P78423 OR13C1P-202ENST00000641378 2919 ntBASIC4.44□□□□□ -1.7
CX3CL1P78423 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CX3CL1P78423 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.44□□□□□ -1.7
CX3CL1P78423 YES1P1-201ENST00000418510 1628 ntBASIC4.44□□□□□ -1.7
CX3CL1P78423 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CX3CL1P78423 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CX3CL1P78423 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.44□□□□□ -1.7
CX3CL1P78423 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CX3CL1P78423 AP000568.1-201ENST00000282964 442 ntBASIC4.44□□□□□ -1.7
CX3CL1P78423 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CX3CL1P78423 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CX3CL1P78423 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.44□□□□□ -1.7
CX3CL1P78423 RNU5B-1-201ENST00000363286 116 ntBASIC4.44□□□□□ -1.7
CX3CL1P78423 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.44□□□□□ -1.7
CX3CL1P78423 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CX3CL1P78423 VN1R51P-201ENST00000411675 945 ntBASIC4.44□□□□□ -1.7
CX3CL1P78423 AL133482.1-201ENST00000415988 498 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms