Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC087385.3-201ENST00000620477 187 ntBASIC4.73□□□□□ -1.65
VSX2P58304 AC074140.1-201ENST00000621617 208 ntBASIC4.73□□□□□ -1.65
VSX2P58304 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.73□□□□□ -1.65
VSX2P58304 AC087821.1-201ENST00000623639 567 ntBASIC4.73□□□□□ -1.65
VSX2P58304 TMEM30CP-203ENST00000637814 1035 ntBASIC4.73□□□□□ -1.65
VSX2P58304 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
VSX2P58304 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.73□□□□□ -1.65
VSX2P58304 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VSX2P58304 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VSX2P58304 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.73□□□□□ -1.65
VSX2P58304 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.73□□□□□ -1.65
VSX2P58304 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VSX2P58304 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.73□□□□□ -1.65
VSX2P58304 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.73□□□□□ -1.65
VSX2P58304 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VSX2P58304 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.73□□□□□ -1.65
VSX2P58304 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VSX2P58304 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.73□□□□□ -1.65
VSX2P58304 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VSX2P58304 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.72□□□□□ -1.65
VSX2P58304 AL731566.1-201ENST00000620490 1937 ntBASIC4.72□□□□□ -1.65
VSX2P58304 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.72□□□□□ -1.65
VSX2P58304 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.72□□□□□ -1.65
VSX2P58304 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.72□□□□□ -1.65
VSX2P58304 AL672167.1-204ENST00000641875 3017 ntBASIC4.72□□□□□ -1.65
VSX2P58304 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.72□□□□□ -1.65
VSX2P58304 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.72□□□□□ -1.65
VSX2P58304 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
VSX2P58304 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.72□□□□□ -1.65
VSX2P58304 GAPDHP15-201ENST00000398586 975 ntBASIC4.72□□□□□ -1.65
VSX2P58304 RN7SKP16-201ENST00000410180 299 ntBASIC4.72□□□□□ -1.65
VSX2P58304 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.72□□□□□ -1.65
VSX2P58304 AC013429.2-201ENST00000418798 781 ntBASIC4.72□□□□□ -1.65
VSX2P58304 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.72□□□□□ -1.65
VSX2P58304 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.72□□□□□ -1.65
VSX2P58304 AC073648.4-201ENST00000442655 781 ntBASIC4.72□□□□□ -1.65
VSX2P58304 AL591623.2-201ENST00000449978 222 ntBASIC4.72□□□□□ -1.65
VSX2P58304 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VSX2P58304 AC093166.2-201ENST00000455969 1017 ntBASIC4.72□□□□□ -1.65
VSX2P58304 AC083982.1-201ENST00000485679 344 ntBASIC4.72□□□□□ -1.65
VSX2P58304 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.72□□□□□ -1.65
VSX2P58304 RN7SL591P-201ENST00000496150 292 ntBASIC4.72□□□□□ -1.65
VSX2P58304 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.72□□□□□ -1.65
VSX2P58304 AC002456.2-201ENST00000509356 380 ntBASIC4.72□□□□□ -1.65
VSX2P58304 EIF4EP5-201ENST00000528228 640 ntBASIC4.72□□□□□ -1.65
VSX2P58304 EIF4A2P5-201ENST00000529914 499 ntBASIC4.72□□□□□ -1.65
VSX2P58304 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.72□□□□□ -1.65
VSX2P58304 PCNPP1-201ENST00000552501 511 ntBASIC4.72□□□□□ -1.65
VSX2P58304 AP001521.2-201ENST00000608772 546 ntBASIC4.72□□□□□ -1.65
VSX2P58304 AL049794.2-201ENST00000616301 365 ntBASIC4.72□□□□□ -1.65
VSX2P58304 AP003072.5-201ENST00000623872 773 ntBASIC4.72□□□□□ -1.65
VSX2P58304 AP001784.1-201ENST00000624107 428 ntBASIC4.72□□□□□ -1.65
VSX2P58304 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.72□□□□□ -1.65
VSX2P58304 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VSX2P58304 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VSX2P58304 AC011447.7-201ENST00000624228 1590 ntBASIC4.72□□□□□ -1.65
VSX2P58304 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
VSX2P58304 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.72□□□□□ -1.65
VSX2P58304 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
VSX2P58304 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VSX2P58304 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
VSX2P58304 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.72□□□□□ -1.65
VSX2P58304 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
VSX2P58304 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VSX2P58304 ZNF652P1-201ENST00000442420 1309 ntBASIC4.72□□□□□ -1.65
VSX2P58304 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.71□□□□□ -1.65
VSX2P58304 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
VSX2P58304 AL022393.1-201ENST00000625142 1677 ntBASIC4.71□□□□□ -1.66
VSX2P58304 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VSX2P58304 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VSX2P58304 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VSX2P58304 AC103591.2-201ENST00000265259 766 ntBASIC4.71□□□□□ -1.66
VSX2P58304 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VSX2P58304 RN7SKP149-201ENST00000363008 344 ntBASIC4.71□□□□□ -1.66
VSX2P58304 SNORA73.1-201ENST00000363107 205 ntBASIC4.71□□□□□ -1.66
VSX2P58304 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VSX2P58304 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VSX2P58304 UBBP2-201ENST00000376781 231 ntBASIC4.71□□□□□ -1.66
VSX2P58304 MIR585-201ENST00000384887 94 ntBASIC4.71□□□□□ -1.66
VSX2P58304 RN7SKP97-201ENST00000410966 333 ntBASIC4.71□□□□□ -1.66
VSX2P58304 RBMY2KP-201ENST00000418221 992 ntBASIC4.71□□□□□ -1.66
VSX2P58304 AC244033.1-201ENST00000426826 870 ntBASIC4.71□□□□□ -1.66
VSX2P58304 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.71□□□□□ -1.66
VSX2P58304 SCAND3P1-201ENST00000439854 1060 ntBASIC4.71□□□□□ -1.66
VSX2P58304 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.71□□□□□ -1.66
VSX2P58304 AL157385.1-201ENST00000446973 268 ntBASIC4.71□□□□□ -1.66
VSX2P58304 AC116562.1-201ENST00000485355 781 ntBASIC4.71□□□□□ -1.66
VSX2P58304 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.71□□□□□ -1.66
VSX2P58304 AC093890.1-201ENST00000502554 540 ntBASIC4.71□□□□□ -1.66
VSX2P58304 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.71□□□□□ -1.66
VSX2P58304 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.71□□□□□ -1.66
VSX2P58304 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.71□□□□□ -1.66
VSX2P58304 MORF4L1P3-201ENST00000525966 950 ntBASIC4.71□□□□□ -1.66
VSX2P58304 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VSX2P58304 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.71□□□□□ -1.66
VSX2P58304 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.71□□□□□ -1.66
VSX2P58304 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.71□□□□□ -1.66
VSX2P58304 AC009117.1-201ENST00000563948 554 ntBASIC4.71□□□□□ -1.66
VSX2P58304 AC005229.3-201ENST00000603438 323 ntBASIC4.71□□□□□ -1.66
VSX2P58304 AL031320.1-201ENST00000604177 357 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms