Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC097523.2-201ENST00000435551 652 ntBASIC4.64□□□□□ -1.67
LIM2P55344 AC112498.1-201ENST00000444401 332 ntBASIC4.64□□□□□ -1.67
LIM2P55344 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.64□□□□□ -1.67
LIM2P55344 AC000111.2-201ENST00000448200 210 ntBASIC4.64□□□□□ -1.67
LIM2P55344 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.64□□□□□ -1.67
LIM2P55344 RN7SL517P-201ENST00000462240 305 ntBASIC4.64□□□□□ -1.67
LIM2P55344 AC116562.1-201ENST00000485355 781 ntBASIC4.64□□□□□ -1.67
LIM2P55344 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.64□□□□□ -1.67
LIM2P55344 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.64□□□□□ -1.67
LIM2P55344 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.64□□□□□ -1.67
LIM2P55344 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 RNU6-513P-201ENST00000516104 104 ntBASIC4.64□□□□□ -1.67
LIM2P55344 RNA5SP392-201ENST00000516905 112 ntBASIC4.64□□□□□ -1.67
LIM2P55344 AC026688.1-201ENST00000520639 1168 ntBASIC4.64□□□□□ -1.67
LIM2P55344 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.64□□□□□ -1.67
LIM2P55344 AL121839.1-201ENST00000556233 1185 ntBASIC4.64□□□□□ -1.67
LIM2P55344 MIR4646-201ENST00000580775 63 ntBASIC4.64□□□□□ -1.67
LIM2P55344 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.64□□□□□ -1.67
LIM2P55344 FAM60CP-201ENST00000591086 664 ntBASIC4.64□□□□□ -1.67
LIM2P55344 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
LIM2P55344 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LIM2P55344 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 CDC27P2-201ENST00000425026 1922 ntBASIC4.64□□□□□ -1.67
LIM2P55344 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.64□□□□□ -1.67
LIM2P55344 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 MTND5P23-201ENST00000430812 1655 ntBASIC4.64□□□□□ -1.67
LIM2P55344 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.64□□□□□ -1.67
LIM2P55344 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LIM2P55344 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LIM2P55344 AC083843.2-201ENST00000568248 6253 ntBASIC4.63□□□□□ -1.67
LIM2P55344 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
LIM2P55344 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIM2P55344 AL603750.1-201ENST00000624216 1717 ntBASIC4.63□□□□□ -1.67
LIM2P55344 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIM2P55344 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.63□□□□□ -1.67
LIM2P55344 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIM2P55344 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.63□□□□□ -1.67
LIM2P55344 AC008758.3-201ENST00000507003 1829 ntBASIC4.63□□□□□ -1.67
LIM2P55344 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIM2P55344 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LIM2P55344 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.63□□□□□ -1.67
LIM2P55344 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.63□□□□□ -1.67
LIM2P55344 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LIM2P55344 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LIM2P55344 SNORA74A-201ENST00000364089 198 ntBASIC4.63□□□□□ -1.67
LIM2P55344 UBBP2-201ENST00000376781 231 ntBASIC4.63□□□□□ -1.67
LIM2P55344 AL645733.1-201ENST00000402250 217 ntBASIC4.63□□□□□ -1.67
LIM2P55344 SEPT7P8-201ENST00000413308 775 ntBASIC4.63□□□□□ -1.67
LIM2P55344 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.63□□□□□ -1.67
LIM2P55344 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LIM2P55344 RPL36AP10-201ENST00000421785 322 ntBASIC4.63□□□□□ -1.67
LIM2P55344 OR2AM1P-201ENST00000422137 422 ntBASIC4.63□□□□□ -1.67
LIM2P55344 RCC2P2-201ENST00000422174 918 ntBASIC4.63□□□□□ -1.67
LIM2P55344 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LIM2P55344 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.63□□□□□ -1.67
LIM2P55344 AC092162.1-201ENST00000432828 434 ntBASIC4.63□□□□□ -1.67
LIM2P55344 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.63□□□□□ -1.67
LIM2P55344 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.63□□□□□ -1.67
LIM2P55344 SUMO2P1-206ENST00000445436 284 ntBASIC4.63□□□□□ -1.67
LIM2P55344 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.63□□□□□ -1.67
LIM2P55344 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.63□□□□□ -1.67
LIM2P55344 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.63□□□□□ -1.67
LIM2P55344 RPL23AP56-201ENST00000460778 453 ntBASIC4.63□□□□□ -1.67
LIM2P55344 RPL32P9-201ENST00000487963 407 ntBASIC4.63□□□□□ -1.67
LIM2P55344 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LIM2P55344 BTF3P13-201ENST00000513224 490 ntBASIC4.63□□□□□ -1.67
LIM2P55344 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.63□□□□□ -1.67
LIM2P55344 RNA5SP249-201ENST00000516127 99 ntBASIC4.63□□□□□ -1.67
LIM2P55344 RNU6-751P-201ENST00000516382 101 ntBASIC4.63□□□□□ -1.67
LIM2P55344 EIF4A2P5-201ENST00000529914 499 ntBASIC4.63□□□□□ -1.67
LIM2P55344 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.63□□□□□ -1.67
LIM2P55344 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.63□□□□□ -1.67
LIM2P55344 AC005000.1-201ENST00000536192 288 ntBASIC4.63□□□□□ -1.67
LIM2P55344 GCSHP4-201ENST00000538792 439 ntBASIC4.63□□□□□ -1.67
LIM2P55344 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.63□□□□□ -1.67
LIM2P55344 AL049830.4-201ENST00000555149 351 ntBASIC4.63□□□□□ -1.67
LIM2P55344 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.63□□□□□ -1.67
LIM2P55344 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.63□□□□□ -1.67
LIM2P55344 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.63□□□□□ -1.67
LIM2P55344 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.63□□□□□ -1.67
LIM2P55344 AC010424.2-201ENST00000607594 443 ntBASIC4.63□□□□□ -1.67
LIM2P55344 AL021707.7-201ENST00000607991 416 ntBASIC4.63□□□□□ -1.67
LIM2P55344 AC015871.5-202ENST00000623252 701 ntBASIC4.63□□□□□ -1.67
LIM2P55344 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.63□□□□□ -1.67
LIM2P55344 CASC19-222ENST00000641321 1173 ntBASIC4.63□□□□□ -1.67
LIM2P55344 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIM2P55344 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIM2P55344 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.63□□□□□ -1.67
LIM2P55344 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.63□□□□□ -1.67
LIM2P55344 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.63□□□□□ -1.67
LIM2P55344 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIM2P55344 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LIM2P55344 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.63□□□□□ -1.67
LIM2P55344 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms