Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NEK3P51956 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
NEK3P51956 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NEK3P51956 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.84□□□□□ -1.47
NEK3P51956 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NEK3P51956 AC239868.2-201ENST00000564237 4527 ntBASIC5.84□□□□□ -1.47
NEK3P51956 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NEK3P51956 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
NEK3P51956 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
NEK3P51956 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
NEK3P51956 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
NEK3P51956 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.84□□□□□ -1.47
NEK3P51956 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NEK3P51956 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NEK3P51956 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
NEK3P51956 RNA5SP394-201ENST00000364216 119 ntBASIC5.84□□□□□ -1.47
NEK3P51956 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NEK3P51956 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.84□□□□□ -1.47
NEK3P51956 YWHAEP5-201ENST00000431545 765 ntBASIC5.84□□□□□ -1.47
NEK3P51956 HMGB3P24-201ENST00000433260 622 ntBASIC5.84□□□□□ -1.47
NEK3P51956 RPL5P25-201ENST00000441148 775 ntBASIC5.84□□□□□ -1.47
NEK3P51956 AC009263.1-201ENST00000441193 1239 ntBASIC5.84□□□□□ -1.47
NEK3P51956 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.84□□□□□ -1.47
NEK3P51956 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
NEK3P51956 TRY2P-201ENST00000448860 689 ntBASIC5.84□□□□□ -1.47
NEK3P51956 LRRC37A14P-201ENST00000452297 462 ntBASIC5.84□□□□□ -1.47
NEK3P51956 YWHAEP1-201ENST00000453697 763 ntBASIC5.84□□□□□ -1.47
NEK3P51956 RPL7P32-201ENST00000457119 744 ntBASIC5.84□□□□□ -1.47
NEK3P51956 RPS27AP2-201ENST00000457576 465 ntBASIC5.84□□□□□ -1.47
NEK3P51956 RN7SL197P-201ENST00000466981 299 ntBASIC5.84□□□□□ -1.47
NEK3P51956 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
NEK3P51956 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NEK3P51956 PRELID3BP6-201ENST00000503839 571 ntBASIC5.84□□□□□ -1.47
NEK3P51956 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.84□□□□□ -1.47
NEK3P51956 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.84□□□□□ -1.47
NEK3P51956 AC109481.1-201ENST00000509173 282 ntBASIC5.84□□□□□ -1.47
NEK3P51956 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.84□□□□□ -1.47
NEK3P51956 GAPDHP62-201ENST00000515313 990 ntBASIC5.84□□□□□ -1.47
NEK3P51956 PRELID3BP4-201ENST00000515476 571 ntBASIC5.84□□□□□ -1.47
NEK3P51956 RNA5SP303-201ENST00000516192 130 ntBASIC5.84□□□□□ -1.47
NEK3P51956 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.84□□□□□ -1.47
NEK3P51956 IGKV2-36-201ENST00000519999 223 ntBASIC5.84□□□□□ -1.47
NEK3P51956 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.84□□□□□ -1.47
NEK3P51956 IGBP1P1-201ENST00000554337 1009 ntBASIC5.84□□□□□ -1.47
NEK3P51956 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.84□□□□□ -1.47
NEK3P51956 AC091057.3-201ENST00000602684 733 ntBASIC5.84□□□□□ -1.47
NEK3P51956 AL137072.1-201ENST00000603444 466 ntBASIC5.84□□□□□ -1.47
NEK3P51956 AC069431.2-201ENST00000604149 1099 ntBASIC5.84□□□□□ -1.47
NEK3P51956 AC010200.2-201ENST00000605098 235 ntBASIC5.84□□□□□ -1.47
NEK3P51956 AC023509.5-201ENST00000617434 807 ntBASIC5.84□□□□□ -1.47
NEK3P51956 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.84□□□□□ -1.47
NEK3P51956 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.84□□□□□ -1.47
NEK3P51956 CDRT1-208ENST00000630868 794 ntBASIC5.84□□□□□ -1.47
NEK3P51956 AC090017.1-201ENST00000548612 1779 ntBASIC5.84□□□□□ -1.47
NEK3P51956 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.84□□□□□ -1.47
NEK3P51956 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
NEK3P51956 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NEK3P51956 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.84□□□□□ -1.47
NEK3P51956 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NEK3P51956 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.84□□□□□ -1.47
NEK3P51956 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.84□□□□□ -1.47
NEK3P51956 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
NEK3P51956 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NEK3P51956 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NEK3P51956 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
NEK3P51956 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
NEK3P51956 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.83□□□□□ -1.48
NEK3P51956 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 AL121839.2-201ENST00000565058 6943 ntBASIC5.83□□□□□ -1.48
NEK3P51956 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NEK3P51956 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 RNA5SP242-201ENST00000364171 118 ntBASIC5.83□□□□□ -1.48
NEK3P51956 RNU1-136P-201ENST00000384181 164 ntBASIC5.83□□□□□ -1.48
NEK3P51956 MIR525-201ENST00000384978 85 ntBASIC5.83□□□□□ -1.48
NEK3P51956 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 RN7SKP293-201ENST00000411389 296 ntBASIC5.83□□□□□ -1.48
NEK3P51956 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.83□□□□□ -1.48
NEK3P51956 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.83□□□□□ -1.48
NEK3P51956 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.83□□□□□ -1.48
NEK3P51956 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.83□□□□□ -1.48
NEK3P51956 PPIAP13-201ENST00000434706 478 ntBASIC5.83□□□□□ -1.48
NEK3P51956 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.83□□□□□ -1.48
NEK3P51956 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NEK3P51956 AC023141.9-201ENST00000458734 412 ntBASIC5.83□□□□□ -1.48
NEK3P51956 RPS23P6-201ENST00000466136 431 ntBASIC5.83□□□□□ -1.48
NEK3P51956 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NEK3P51956 TRAV31-201ENST00000502780 342 ntBASIC5.83□□□□□ -1.48
NEK3P51956 AC119751.1-201ENST00000513357 765 ntBASIC5.83□□□□□ -1.48
NEK3P51956 SCARNA6.1-201ENST00000516989 238 ntBASIC5.83□□□□□ -1.48
NEK3P51956 COX6B1P6-201ENST00000522347 255 ntBASIC5.83□□□□□ -1.48
NEK3P51956 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.83□□□□□ -1.48
NEK3P51956 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.83□□□□□ -1.48
NEK3P51956 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms