Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RNA5SP230-201ENST00000517039 122 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 AC027308.1-201ENST00000517993 110 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCNKAP51800 OSBPL9P3-201ENST00000534523 595 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCNKAP51800 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCNKAP51800 LSM3P2-201ENST00000551246 273 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.2□□□□□ -1.58
CLCNKAP51800 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCNKAP51800 BNIP3P40-201ENST00000596017 556 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCNKAP51800 AC108738.1-201ENST00000603703 237 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 AL592494.3-201ENST00000609485 464 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 AL121612.2-201ENST00000612261 482 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 AL121890.2-201ENST00000617644 465 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 RMST_5.1-201ENST00000618704 126 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 AC095038.2-201ENST00000621464 1070 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLCNKAP51800 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLCNKAP51800 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 C4BPAP1-201ENST00000415474 1893 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCNKAP51800 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLCNKAP51800 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCNKAP51800 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CLCNKAP51800 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CLCNKAP51800 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCNKAP51800 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCNKAP51800 AC017002.4-201ENST00000604721 1525 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCNKAP51800 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CLCNKAP51800 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCNKAP51800 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCNKAP51800 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCNKAP51800 AL035405.1-201ENST00000400795 710 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 DUTP5-201ENST00000406790 469 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 RN7SKP278-201ENST00000410504 342 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCNKAP51800 RANP4-201ENST00000413361 655 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 GLUD1P9-201ENST00000420997 1173 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 ARL2BPP3-201ENST00000421226 480 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCNKAP51800 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCNKAP51800 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCNKAP51800 AC124944.2-201ENST00000429866 1242 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCNKAP51800 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCNKAP51800 AC245517.2-201ENST00000442890 346 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 AC016772.1-201ENST00000444170 1261 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 ATP5G1P3-201ENST00000463301 410 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 IGBP1P4-201ENST00000503202 879 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCNKAP51800 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCNKAP51800 AC112198.4-201ENST00000515450 351 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCNKAP51800 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCNKAP51800 AC024940.3-201ENST00000538551 316 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 AC127381.1-201ENST00000555979 939 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCNKAP51800 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLCNKAP51800 AC011447.4-201ENST00000587562 111 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCNKAP51800 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLCNKAP51800 AC007786.3-201ENST00000615154 596 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 AC015722.2-201ENST00000622210 551 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 MIR6719-201ENST00000622428 87 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCNKAP51800 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCNKAP51800 OR5AC4P-202ENST00000642086 985 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCNKAP51800 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCNKAP51800 AC109780.1-201ENST00000451768 1344 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLCNKAP51800 AC079298.1-201ENST00000625026 1619 ntBASIC5.19□□□□□ -1.58
CLCNKAP51800 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCNKAP51800 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CLCNKAP51800 HSPA8P19-201ENST00000505359 1517 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLCNKAP51800 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCNKAP51800 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CLCNKAP51800 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.18□□□□□ -1.58
CLCNKAP51800 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CLCNKAP51800 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCNKAP51800 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.18□□□□□ -1.58
CLCNKAP51800 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCNKAP51800 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCNKAP51800 AL356317.1-201ENST00000396110 1436 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CLCNKAP51800 RNU1-19P-201ENST00000363306 165 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 RNU6-792P-201ENST00000363490 107 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCNKAP51800 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms