Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC5.03□□□□□ -1.6
HTTP42858 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.03□□□□□ -1.6
HTTP42858 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HTTP42858 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC5.03□□□□□ -1.6
HTTP42858 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 MIR491-201ENST00000384877 84 ntBASIC5.03□□□□□ -1.6
HTTP42858 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.03□□□□□ -1.6
HTTP42858 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.03□□□□□ -1.6
HTTP42858 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.03□□□□□ -1.6
HTTP42858 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.03□□□□□ -1.6
HTTP42858 AC092709.1-201ENST00000521355 1045 ntBASIC5.03□□□□□ -1.6
HTTP42858 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.03□□□□□ -1.6
HTTP42858 AL357559.1-201ENST00000622228 274 ntBASIC5.03□□□□□ -1.6
HTTP42858 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.03□□□□□ -1.6
HTTP42858 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
HTTP42858 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HTTP42858 MFSD13B-201ENST00000420133 1290 ntBASIC5.03□□□□□ -1.6
HTTP42858 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.03□□□□□ -1.6
HTTP42858 SOD1P3-201ENST00000518682 454 ntBASIC5.03□□□□□ -1.6
HTTP42858 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.03□□□□□ -1.6
HTTP42858 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.03□□□□□ -1.6
HTTP42858 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.03□□□□□ -1.6
HTTP42858 AL442067.2-201ENST00000614033 363 ntBASIC5.03□□□□□ -1.6
HTTP42858 AC007546.1-201ENST00000619452 559 ntBASIC5.03□□□□□ -1.6
HTTP42858 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.03□□□□□ -1.6
HTTP42858 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.03□□□□□ -1.6
HTTP42858 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HTTP42858 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HTTP42858 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.02□□□□□ -1.61
HTTP42858 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HTTP42858 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HTTP42858 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HTTP42858 AC022893.2-201ENST00000564832 3296 ntBASIC5.02□□□□□ -1.61
HTTP42858 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.02□□□□□ -1.61
HTTP42858 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.02□□□□□ -1.61
HTTP42858 AC090142.1-201ENST00000465776 462 ntBASIC5.02□□□□□ -1.61
HTTP42858 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.02□□□□□ -1.61
HTTP42858 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.02□□□□□ -1.61
HTTP42858 AC018695.5-201ENST00000605872 315 ntBASIC5.02□□□□□ -1.61
HTTP42858 AC009120.7-201ENST00000623452 780 ntBASIC5.02□□□□□ -1.61
HTTP42858 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HTTP42858 AL672167.1-203ENST00000641299 2975 ntBASIC5.02□□□□□ -1.61
HTTP42858 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HTTP42858 AC105342.1-201ENST00000378334 6848 ntBASIC5.02□□□□□ -1.61
HTTP42858 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.02□□□□□ -1.61
HTTP42858 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HTTP42858 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.02□□□□□ -1.61
HTTP42858 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HTTP42858 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HTTP42858 Y_RNA.111-201ENST00000363248 100 ntBASIC5.02□□□□□ -1.61
HTTP42858 MIR3065-201ENST00000390137 79 ntBASIC5.02□□□□□ -1.61
HTTP42858 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HTTP42858 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.02□□□□□ -1.61
HTTP42858 AC107982.3-201ENST00000584957 985 ntBASIC5.02□□□□□ -1.61
HTTP42858 AC012314.7-201ENST00000619693 93 ntBASIC5.02□□□□□ -1.61
HTTP42858 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HTTP42858 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HTTP42858 MIR634-201ENST00000385208 97 ntBASIC5.01□□□□□ -1.61
HTTP42858 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.01□□□□□ -1.61
HTTP42858 AC068533.1-201ENST00000418542 415 ntBASIC5.01□□□□□ -1.61
HTTP42858 KRR1P1-201ENST00000419430 803 ntBASIC5.01□□□□□ -1.61
HTTP42858 AC092647.1-201ENST00000420654 287 ntBASIC5.01□□□□□ -1.61
HTTP42858 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.01□□□□□ -1.61
HTTP42858 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
HTTP42858 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HTTP42858 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HTTP42858 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.01□□□□□ -1.61
HTTP42858 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.01□□□□□ -1.61
HTTP42858 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.01□□□□□ -1.61
HTTP42858 RNA5SP513-201ENST00000364648 118 ntBASIC5.01□□□□□ -1.61
HTTP42858 AP000907.1-201ENST00000428428 510 ntBASIC5.01□□□□□ -1.61
HTTP42858 AL035246.1-201ENST00000433554 1255 ntBASIC5.01□□□□□ -1.61
HTTP42858 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.01□□□□□ -1.61
HTTP42858 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.01□□□□□ -1.61
HTTP42858 AC090589.1-201ENST00000473109 362 ntBASIC5.01□□□□□ -1.61
HTTP42858 RN7SKP83-201ENST00000516512 178 ntBASIC5.01□□□□□ -1.61
HTTP42858 AL049830.4-201ENST00000555149 351 ntBASIC5.01□□□□□ -1.61
HTTP42858 AL161729.3-201ENST00000603533 673 ntBASIC5.01□□□□□ -1.61
HTTP42858 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.01□□□□□ -1.61
HTTP42858 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HTTP42858 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HTTP42858 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
HTTP42858 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HTTP42858 AC106871.1-201ENST00000568324 3102 ntBASIC5.01□□□□□ -1.61
HTTP42858 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.01□□□□□ -1.61
HTTP42858 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HTTP42858 SNORA73.2-201ENST00000364946 201 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms