Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CD40P25942 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD40P25942 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
CD40P25942 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD40P25942 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD40P25942 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD40P25942 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CD40P25942 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CD40P25942 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CD40P25942 RNU6-660P-201ENST00000364566 109 ntBASIC5.53□□□□□ -1.52
CD40P25942 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD40P25942 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD40P25942 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.53□□□□□ -1.52
CD40P25942 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.53□□□□□ -1.52
CD40P25942 AL157702.1-201ENST00000398764 426 ntBASIC5.53□□□□□ -1.52
CD40P25942 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD40P25942 AL663109.1-201ENST00000411498 844 ntBASIC5.53□□□□□ -1.52
CD40P25942 AF274854.1-201ENST00000413236 615 ntBASIC5.53□□□□□ -1.52
CD40P25942 FCF1P2-201ENST00000415284 583 ntBASIC5.53□□□□□ -1.52
CD40P25942 RPL23AP39-201ENST00000415533 405 ntBASIC5.53□□□□□ -1.52
CD40P25942 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD40P25942 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.53□□□□□ -1.52
CD40P25942 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.53□□□□□ -1.52
CD40P25942 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 TMX2P1-201ENST00000436507 708 ntBASIC5.53□□□□□ -1.52
CD40P25942 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 AL138899.2-201ENST00000439139 499 ntBASIC5.53□□□□□ -1.52
CD40P25942 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 AL645936.1-201ENST00000441979 518 ntBASIC5.53□□□□□ -1.52
CD40P25942 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.53□□□□□ -1.52
CD40P25942 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD40P25942 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.53□□□□□ -1.52
CD40P25942 RPL37P3-201ENST00000456825 293 ntBASIC5.53□□□□□ -1.52
CD40P25942 NF1P3-201ENST00000457709 450 ntBASIC5.53□□□□□ -1.52
CD40P25942 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 CBX3P3-201ENST00000508108 532 ntBASIC5.53□□□□□ -1.52
CD40P25942 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CD40P25942 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.53□□□□□ -1.52
CD40P25942 SNORA48.10-201ENST00000516965 160 ntBASIC5.53□□□□□ -1.52
CD40P25942 SCARNA6.1-201ENST00000516989 238 ntBASIC5.53□□□□□ -1.52
CD40P25942 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.53□□□□□ -1.52
CD40P25942 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.53□□□□□ -1.52
CD40P25942 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 IGHV4-55-201ENST00000520889 368 ntBASIC5.53□□□□□ -1.52
CD40P25942 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.53□□□□□ -1.52
CD40P25942 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 AC093519.1-201ENST00000566109 298 ntBASIC5.53□□□□□ -1.52
CD40P25942 AC002519.2-203ENST00000567043 837 ntBASIC5.53□□□□□ -1.52
CD40P25942 AC012414.6-201ENST00000568241 401 ntBASIC5.53□□□□□ -1.52
CD40P25942 MIR5095-201ENST00000578844 88 ntBASIC5.53□□□□□ -1.52
CD40P25942 MIR4502-201ENST00000580432 81 ntBASIC5.53□□□□□ -1.52
CD40P25942 RN7SL475P-201ENST00000583379 298 ntBASIC5.53□□□□□ -1.52
CD40P25942 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.53□□□□□ -1.52
CD40P25942 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.53□□□□□ -1.52
CD40P25942 AC139493.1-201ENST00000604368 397 ntBASIC5.53□□□□□ -1.52
CD40P25942 AC009027.1-201ENST00000604510 479 ntBASIC5.53□□□□□ -1.52
CD40P25942 RPSAP75-201ENST00000605848 301 ntBASIC5.53□□□□□ -1.52
CD40P25942 AC239868.4-201ENST00000608318 671 ntBASIC5.53□□□□□ -1.52
CD40P25942 AL354760.1-201ENST00000608357 643 ntBASIC5.53□□□□□ -1.52
CD40P25942 AC106028.5-201ENST00000610332 395 ntBASIC5.53□□□□□ -1.52
CD40P25942 OR7E91P-202ENST00000642062 1198 ntBASIC5.53□□□□□ -1.52
CD40P25942 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.53□□□□□ -1.52
CD40P25942 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.53□□□□□ -1.52
CD40P25942 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.53□□□□□ -1.52
CD40P25942 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CD40P25942 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CD40P25942 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CD40P25942 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD40P25942 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD40P25942 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.53□□□□□ -1.52
CD40P25942 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.53□□□□□ -1.52
CD40P25942 RAD17P2-201ENST00000451754 1977 ntBASIC5.53□□□□□ -1.52
CD40P25942 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.53□□□□□ -1.52
CD40P25942 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CD40P25942 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD40P25942 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD40P25942 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CD40P25942 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CD40P25942 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.52□□□□□ -1.53
CD40P25942 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD40P25942 AL359976.1-201ENST00000418655 3528 ntBASIC5.52□□□□□ -1.53
CD40P25942 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.52□□□□□ -1.53
CD40P25942 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD40P25942 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD40P25942 AL356473.1-201ENST00000406203 1408 ntBASIC5.52□□□□□ -1.53
CD40P25942 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CD40P25942 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.52□□□□□ -1.53
CD40P25942 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CD40P25942 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CD40P25942 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms