Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFRAP16234 AC211486.3-201ENST00000412694 621 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 RPL23AP27-201ENST00000415161 451 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFRAP16234 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFRAP16234 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.36□□□□□ -1.55
PDGFRAP16234 COX6CP13-201ENST00000428703 226 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 RPL7L1P1-201ENST00000448259 785 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 MTND2P3-201ENST00000452458 470 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 AC069277.2-201ENST00000454211 432 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 AC245028.2-201ENST00000458673 253 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.36□□□□□ -1.55
PDGFRAP16234 AC091180.1-201ENST00000462104 372 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFRAP16234 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.36□□□□□ -1.55
PDGFRAP16234 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.36□□□□□ -1.55
PDGFRAP16234 RNA5SP230-201ENST00000517039 122 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 HMGN2P6-201ENST00000551091 273 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 AC127024.5-201ENST00000580085 462 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.36□□□□□ -1.55
PDGFRAP16234 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFRAP16234 AC006116.3-201ENST00000592968 361 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFRAP16234 AC138965.3-201ENST00000623875 498 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 AL118508.4-201ENST00000624142 1176 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 AC019080.5-201ENST00000624891 757 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 AC092159.4-201ENST00000624944 550 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFRAP16234 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFRAP16234 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFRAP16234 Z95331.1-201ENST00000623075 23112 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 CASC19-281ENST00000642118 1554 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFRAP16234 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFRAP16234 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFRAP16234 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFRAP16234 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFRAP16234 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFRAP16234 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFRAP16234 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PDGFRAP16234 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFRAP16234 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFRAP16234 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFRAP16234 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFRAP16234 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.35□□□□□ -1.55
PDGFRAP16234 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFRAP16234 RN7SKP113-201ENST00000363891 295 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFRAP16234 SNORA2.3-201ENST00000383920 135 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 AL034403.1-201ENST00000399414 885 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFRAP16234 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFRAP16234 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFRAP16234 AC004980.3-201ENST00000447046 365 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFRAP16234 AC021660.1-201ENST00000465006 554 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 RPL32P9-201ENST00000487963 407 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFRAP16234 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFRAP16234 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFRAP16234 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.35□□□□□ -1.55
PDGFRAP16234 AC109635.6-201ENST00000525487 1113 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFRAP16234 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFRAP16234 AC006349.1-201ENST00000555526 235 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFRAP16234 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFRAP16234 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFRAP16234 MIMT1-201ENST00000597105 1050 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.35□□□□□ -1.55
PDGFRAP16234 AC018695.5-201ENST00000605872 315 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 AC005021.1-201ENST00000608730 355 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 AC009163.6-201ENST00000612367 342 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 AC004817.4-201ENST00000602396 3625 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.35□□□□□ -1.55
PDGFRAP16234 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.35□□□□□ -1.55
PDGFRAP16234 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFRAP16234 AC104623.2-202ENST00000623477 4002 ntBASIC5.35□□□□□ -1.55
PDGFRAP16234 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PDGFRAP16234 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFRAP16234 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFRAP16234 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFRAP16234 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFRAP16234 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PDGFRAP16234 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFRAP16234 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFRAP16234 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFRAP16234 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
PDGFRAP16234 BMS1P3-201ENST00000372011 932 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.34□□□□□ -1.55
PDGFRAP16234 RPL5P19-201ENST00000404228 893 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 RN7SKP114-201ENST00000410327 279 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 AL121878.1-201ENST00000418638 859 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 HMGN2P27-201ENST00000427352 270 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 AC007563.3-201ENST00000433233 371 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 RSL24D1P8-201ENST00000434442 492 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 NPM1P39-201ENST00000449818 867 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 AC092647.2-201ENST00000452998 253 ntBASIC5.34□□□□□ -1.55
PDGFRAP16234 HSPE1P22-201ENST00000456856 327 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms