Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC017079.1-201ENST00000333650 415 ntBASIC8.13□□□□□ -1.11
TOP2AP11388 AC021660.1-201ENST00000465006 554 ntBASIC8.13□□□□□ -1.11
TOP2AP11388 F11-205ENST00000492972 1204 ntTSL 2 BASIC8.13□□□□□ -1.11
TOP2AP11388 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.13□□□□□ -1.11
TOP2AP11388 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC8.13□□□□□ -1.11
TOP2AP11388 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC8.13□□□□□ -1.11
TOP2AP11388 AC106785.1-201ENST00000565935 262 ntBASIC8.13□□□□□ -1.11
TOP2AP11388 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TOP2AP11388 WAC-209ENST00000428935 1320 ntTSL 2 BASIC8.13□□□□□ -1.11
TOP2AP11388 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
TOP2AP11388 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
TOP2AP11388 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TOP2AP11388 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TOP2AP11388 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TOP2AP11388 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TOP2AP11388 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TOP2AP11388 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TOP2AP11388 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TOP2AP11388 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
TOP2AP11388 RNA5SP366-201ENST00000365454 123 ntBASIC8.12□□□□□ -1.11
TOP2AP11388 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TOP2AP11388 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC8.12□□□□□ -1.11
TOP2AP11388 AC114755.5-201ENST00000447760 831 ntBASIC8.12□□□□□ -1.11
TOP2AP11388 AL359073.1-201ENST00000448036 403 ntBASIC8.12□□□□□ -1.11
TOP2AP11388 DHFRP3-201ENST00000455595 559 ntBASIC8.12□□□□□ -1.11
TOP2AP11388 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC8.12□□□□□ -1.11
TOP2AP11388 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TOP2AP11388 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC8.12□□□□□ -1.11
TOP2AP11388 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC8.12□□□□□ -1.11
TOP2AP11388 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC8.12□□□□□ -1.11
TOP2AP11388 MIR6891-201ENST00000618788 93 ntBASIC8.12□□□□□ -1.11
TOP2AP11388 PDCD6IPP1-202ENST00000622242 1064 ntBASIC8.12□□□□□ -1.11
TOP2AP11388 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC8.12□□□□□ -1.11
TOP2AP11388 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TOP2AP11388 AC104118.1-201ENST00000607625 1589 ntBASIC8.12□□□□□ -1.11
TOP2AP11388 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC8.11□□□□□ -1.11
TOP2AP11388 CPHL1P-201ENST00000461341 3407 ntBASIC8.11□□□□□ -1.11
TOP2AP11388 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
TOP2AP11388 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC8.11□□□□□ -1.11
TOP2AP11388 RNU11-201ENST00000387069 134 ntBASIC8.11□□□□□ -1.11
TOP2AP11388 AL022722.2-201ENST00000402519 180 ntBASIC8.11□□□□□ -1.11
TOP2AP11388 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC8.11□□□□□ -1.11
TOP2AP11388 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC8.11□□□□□ -1.11
TOP2AP11388 AL360012.1-201ENST00000602813 131 ntBASIC8.11□□□□□ -1.11
TOP2AP11388 AP005019.3-201ENST00000620418 560 ntBASIC8.11□□□□□ -1.11
TOP2AP11388 AL023881.1-201ENST00000621088 301 ntBASIC8.11□□□□□ -1.11
TOP2AP11388 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
TOP2AP11388 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TOP2AP11388 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TOP2AP11388 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
TOP2AP11388 ST7-212ENST00000422922 1887 ntTSL 5 BASIC8.11□□□□□ -1.11
TOP2AP11388 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
TOP2AP11388 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
TOP2AP11388 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TOP2AP11388 MGP-201ENST00000228938 694 ntTSL 3 BASIC8.1□□□□□ -1.11
TOP2AP11388 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC8.1□□□□□ -1.11
TOP2AP11388 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TOP2AP11388 RPL23AP26-201ENST00000412728 464 ntBASIC8.1□□□□□ -1.11
TOP2AP11388 UQCRHP4-201ENST00000471686 272 ntBASIC8.1□□□□□ -1.11
TOP2AP11388 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC8.1□□□□□ -1.11
TOP2AP11388 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TOP2AP11388 AC108475.1-201ENST00000507880 950 ntBASIC8.1□□□□□ -1.11
TOP2AP11388 ARL6IP1P1-201ENST00000545836 610 ntBASIC8.1□□□□□ -1.11
TOP2AP11388 AC006349.1-201ENST00000555526 235 ntBASIC8.1□□□□□ -1.11
TOP2AP11388 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC8.1□□□□□ -1.11
TOP2AP11388 AC093227.2-201ENST00000589357 285 ntBASIC8.1□□□□□ -1.11
TOP2AP11388 AL137141.1-201ENST00000624622 4836 ntBASIC8.1□□□□□ -1.11
TOP2AP11388 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TOP2AP11388 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
TOP2AP11388 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TOP2AP11388 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TOP2AP11388 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC8.1□□□□□ -1.11
TOP2AP11388 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TOP2AP11388 BMPR1APS1-201ENST00000403332 1598 ntBASIC8.09□□□□□ -1.11
TOP2AP11388 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TOP2AP11388 CASKP1-201ENST00000412870 582 ntBASIC8.09□□□□□ -1.11
TOP2AP11388 RPS12P10-201ENST00000427031 377 ntBASIC8.09□□□□□ -1.11
TOP2AP11388 NFYAP1-201ENST00000431953 972 ntBASIC8.09□□□□□ -1.11
TOP2AP11388 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TOP2AP11388 AC091167.1-201ENST00000492017 396 ntBASIC8.09□□□□□ -1.11
TOP2AP11388 RPS27AP16-201ENST00000492222 470 ntBASIC8.09□□□□□ -1.11
TOP2AP11388 AC010476.1-201ENST00000519111 851 ntBASIC8.09□□□□□ -1.11
TOP2AP11388 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC8.09□□□□□ -1.11
TOP2AP11388 AC020634.1-201ENST00000608701 549 ntBASIC8.09□□□□□ -1.11
TOP2AP11388 AC005899.7-201ENST00000618199 588 ntBASIC8.09□□□□□ -1.11
TOP2AP11388 AP003497.2-201ENST00000624220 967 ntBASIC8.09□□□□□ -1.11
TOP2AP11388 RNA5SP196-201ENST00000625967 102 ntBASIC8.09□□□□□ -1.11
TOP2AP11388 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TOP2AP11388 EIF2AP4-201ENST00000424793 1781 ntBASIC8.09□□□□□ -1.11
TOP2AP11388 AC092376.2-201ENST00000622621 4116 ntBASIC8.09□□□□□ -1.11
TOP2AP11388 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
TOP2AP11388 AC022417.1-201ENST00000624768 1303 ntBASIC8.09□□□□□ -1.12
TOP2AP11388 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
TOP2AP11388 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
TOP2AP11388 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
TOP2AP11388 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC8.08□□□□□ -1.12
TOP2AP11388 OR8G2P-201ENST00000412796 908 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 AC011933.1-201ENST00000413334 321 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 AL158073.1-201ENST00000426848 1104 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms