Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CHGAP10645 PPIAP24-201ENST00000328558 471 ntBASIC9.81□□□□□ -0.84
CHGAP10645 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
CHGAP10645 DNAJA1P4-201ENST00000406473 1166 ntBASIC9.81□□□□□ -0.84
CHGAP10645 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC9.81□□□□□ -0.84
CHGAP10645 AL139128.1-201ENST00000413921 941 ntBASIC9.81□□□□□ -0.84
CHGAP10645 AL773545.3-201ENST00000414297 706 ntBASIC9.81□□□□□ -0.84
CHGAP10645 HMGB3P20-201ENST00000417997 600 ntBASIC9.81□□□□□ -0.84
CHGAP10645 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC9.81□□□□□ -0.84
CHGAP10645 KRTAP3-4P-201ENST00000430780 280 ntBASIC9.81□□□□□ -0.84
CHGAP10645 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC9.81□□□□□ -0.84
CHGAP10645 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC9.81□□□□□ -0.84
CHGAP10645 AC002486.1-201ENST00000435098 391 ntBASIC9.81□□□□□ -0.84
CHGAP10645 AC009961.2-201ENST00000435771 251 ntBASIC9.81□□□□□ -0.84
CHGAP10645 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC9.81□□□□□ -0.84
CHGAP10645 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC9.81□□□□□ -0.84
CHGAP10645 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC9.81□□□□□ -0.84
CHGAP10645 RN7SL39P-201ENST00000462264 297 ntBASIC9.81□□□□□ -0.84
CHGAP10645 RPL35P6-201ENST00000490024 372 ntBASIC9.81□□□□□ -0.84
CHGAP10645 SCG5-207ENST00000497208 949 ntTSL 5 BASIC9.81□□□□□ -0.84
CHGAP10645 snoU109.5-201ENST00000516231 132 ntBASIC9.81□□□□□ -0.84
CHGAP10645 HSPA8P13-201ENST00000523715 472 ntBASIC9.81□□□□□ -0.84
CHGAP10645 EEF1A1P17-201ENST00000547505 1275 ntBASIC9.81□□□□□ -0.84
CHGAP10645 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC9.81□□□□□ -0.84
CHGAP10645 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
CHGAP10645 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC9.81□□□□□ -0.84
CHGAP10645 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC9.81□□□□□ -0.84
CHGAP10645 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC9.81□□□□□ -0.84
CHGAP10645 AC087283.1-201ENST00000604029 1074 ntBASIC9.81□□□□□ -0.84
CHGAP10645 AC018695.5-201ENST00000605872 315 ntBASIC9.81□□□□□ -0.84
CHGAP10645 AC015982.1-201ENST00000608113 465 ntBASIC9.81□□□□□ -0.84
CHGAP10645 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC9.81□□□□□ -0.84
CHGAP10645 AC093838.1-201ENST00000613014 469 ntBASIC9.81□□□□□ -0.84
CHGAP10645 AL160413.1-201ENST00000622780 310 ntBASIC9.81□□□□□ -0.84
CHGAP10645 SNX18P10-201ENST00000625014 519 ntBASIC9.81□□□□□ -0.84
CHGAP10645 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC9.81□□□□□ -0.84
CHGAP10645 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC9.81□□□□□ -0.84
CHGAP10645 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC9.81□□□□□ -0.84
CHGAP10645 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
CHGAP10645 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC9.81□□□□□ -0.84
CHGAP10645 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
CHGAP10645 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC9.81□□□□□ -0.84
CHGAP10645 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHGAP10645 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC9.81□□□□□ -0.84
CHGAP10645 AC046144.1-201ENST00000478559 1853 ntBASIC9.81□□□□□ -0.84
CHGAP10645 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHGAP10645 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC9.8□□□□□ -0.84
CHGAP10645 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
CHGAP10645 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
CHGAP10645 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
CHGAP10645 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHGAP10645 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHGAP10645 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CHGAP10645 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC9.8□□□□□ -0.84
CHGAP10645 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHGAP10645 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHGAP10645 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHGAP10645 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHGAP10645 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHGAP10645 LINC01613-201ENST00000561476 2780 ntBASIC9.8□□□□□ -0.84
CHGAP10645 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHGAP10645 RNU6-582P-201ENST00000362989 107 ntBASIC9.8□□□□□ -0.84
CHGAP10645 RN7SKP237-201ENST00000364663 301 ntBASIC9.8□□□□□ -0.84
CHGAP10645 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC9.8□□□□□ -0.84
CHGAP10645 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHGAP10645 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
CHGAP10645 RN7SKP240-201ENST00000410583 375 ntBASIC9.8□□□□□ -0.84
CHGAP10645 RSU1P3-201ENST00000412878 835 ntBASIC9.8□□□□□ -0.84
CHGAP10645 SNRPEP10-201ENST00000420249 274 ntBASIC9.8□□□□□ -0.84
CHGAP10645 PIGFP2-201ENST00000421400 651 ntBASIC9.8□□□□□ -0.84
CHGAP10645 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC9.8□□□□□ -0.84
CHGAP10645 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC9.8□□□□□ -0.84
CHGAP10645 AL935212.3-201ENST00000450729 284 ntBASIC9.8□□□□□ -0.84
CHGAP10645 AC135721.2-201ENST00000464237 300 ntBASIC9.8□□□□□ -0.84
CHGAP10645 AC021205.1-201ENST00000468797 348 ntBASIC9.8□□□□□ -0.84
CHGAP10645 RPL7AP23-201ENST00000482625 776 ntBASIC9.8□□□□□ -0.84
CHGAP10645 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CHGAP10645 OR7E99P-201ENST00000505750 922 ntBASIC9.8□□□□□ -0.84
CHGAP10645 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC9.8□□□□□ -0.84
CHGAP10645 AC093870.1-201ENST00000506837 213 ntBASIC9.8□□□□□ -0.84
CHGAP10645 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC9.8□□□□□ -0.84
CHGAP10645 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC9.8□□□□□ -0.84
CHGAP10645 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC9.8□□□□□ -0.84
CHGAP10645 AP003034.1-201ENST00000534621 422 ntBASIC9.8□□□□□ -0.84
CHGAP10645 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC9.8□□□□□ -0.84
CHGAP10645 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC9.8□□□□□ -0.84
CHGAP10645 AC018558.5-201ENST00000565840 952 ntBASIC9.8□□□□□ -0.84
CHGAP10645 ZNF322P1-201ENST00000568013 1209 ntBASIC9.8□□□□□ -0.84
CHGAP10645 ANP32BP1-202ENST00000568553 737 ntBASIC9.8□□□□□ -0.84
CHGAP10645 AC141257.3-201ENST00000572906 215 ntBASIC9.8□□□□□ -0.84
CHGAP10645 CTSLP2-201ENST00000580501 394 ntBASIC9.8□□□□□ -0.84
CHGAP10645 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC9.8□□□□□ -0.84
CHGAP10645 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC9.8□□□□□ -0.84
CHGAP10645 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC9.8□□□□□ -0.84
CHGAP10645 AC091133.5-201ENST00000603088 301 ntBASIC9.8□□□□□ -0.84
CHGAP10645 AC013553.2-201ENST00000604244 589 ntBASIC9.8□□□□□ -0.84
CHGAP10645 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC9.8□□□□□ -0.84
CHGAP10645 AC104010.1-201ENST00000616889 150 ntBASIC9.8□□□□□ -0.84
CHGAP10645 PISRT1-201ENST00000626175 531 ntBASIC9.8□□□□□ -0.84
CHGAP10645 AC110994.2-201ENST00000635481 492 ntBASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms