Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.66□□□□□ -1.34
PDGFAP04085 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC6.66□□□□□ -1.34
PDGFAP04085 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.66□□□□□ -1.34
PDGFAP04085 LRRC34P2-201ENST00000514850 553 ntBASIC6.66□□□□□ -1.34
PDGFAP04085 IGLV1-62-201ENST00000518003 441 ntBASIC6.66□□□□□ -1.34
PDGFAP04085 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.66□□□□□ -1.34
PDGFAP04085 AP003467.2-201ENST00000520175 319 ntBASIC6.66□□□□□ -1.34
PDGFAP04085 AF279873.1-201ENST00000523393 313 ntBASIC6.66□□□□□ -1.34
PDGFAP04085 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.66□□□□□ -1.34
PDGFAP04085 AL512310.1-201ENST00000548639 172 ntBASIC6.66□□□□□ -1.34
PDGFAP04085 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.66□□□□□ -1.34
PDGFAP04085 AL138976.2-201ENST00000563989 694 ntBASIC6.66□□□□□ -1.34
PDGFAP04085 MIR4312-201ENST00000579909 76 ntBASIC6.66□□□□□ -1.34
PDGFAP04085 MIR544B-201ENST00000582372 78 ntBASIC6.66□□□□□ -1.34
PDGFAP04085 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.66□□□□□ -1.34
PDGFAP04085 AC018695.5-201ENST00000605872 315 ntBASIC6.66□□□□□ -1.34
PDGFAP04085 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PDGFAP04085 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PDGFAP04085 uc_338.9-201ENST00000617424 182 ntBASIC6.66□□□□□ -1.34
PDGFAP04085 U1.31-201ENST00000620022 160 ntBASIC6.66□□□□□ -1.34
PDGFAP04085 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.66□□□□□ -1.34
PDGFAP04085 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
PDGFAP04085 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PDGFAP04085 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.66□□□□□ -1.34
PDGFAP04085 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.66□□□□□ -1.34
PDGFAP04085 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PDGFAP04085 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
PDGFAP04085 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
PDGFAP04085 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PDGFAP04085 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
PDGFAP04085 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
PDGFAP04085 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PDGFAP04085 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.66□□□□□ -1.34
PDGFAP04085 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PDGFAP04085 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PDGFAP04085 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC6.66□□□□□ -1.34
PDGFAP04085 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.65□□□□□ -1.34
PDGFAP04085 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PDGFAP04085 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PDGFAP04085 AC007406.5-201ENST00000570140 3170 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.65□□□□□ -1.34
PDGFAP04085 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
PDGFAP04085 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
PDGFAP04085 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PDGFAP04085 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PDGFAP04085 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PDGFAP04085 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
PDGFAP04085 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
PDGFAP04085 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.65□□□□□ -1.34
PDGFAP04085 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
PDGFAP04085 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.65□□□□□ -1.34
PDGFAP04085 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PDGFAP04085 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PDGFAP04085 ATM-215ENST00000530958 5718 ntTSL 2 BASIC6.65□□□□□ -1.34
PDGFAP04085 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
PDGFAP04085 RNY4P34-201ENST00000364779 95 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.65□□□□□ -1.34
PDGFAP04085 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
PDGFAP04085 Y_RNA.535-201ENST00000384612 99 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 MIR640-201ENST00000385086 96 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 RNA5SP53-201ENST00000391299 120 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 AL590762.1-201ENST00000391782 432 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.65□□□□□ -1.34
PDGFAP04085 RNU2-28P-201ENST00000410457 189 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 RNA5SP280-201ENST00000411230 115 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.65□□□□□ -1.34
PDGFAP04085 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.65□□□□□ -1.34
PDGFAP04085 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.65□□□□□ -1.34
PDGFAP04085 FCF1P1-201ENST00000432690 571 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 AC009961.2-201ENST00000435771 251 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 Z82190.1-201ENST00000454534 490 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 RPL23AP12-201ENST00000467573 473 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 MARK2P8-201ENST00000476069 952 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 RN7SL502P-201ENST00000481857 290 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.65□□□□□ -1.34
PDGFAP04085 OR5M14P-201ENST00000506803 618 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 AC114786.4-201ENST00000508771 728 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.65□□□□□ -1.34
PDGFAP04085 IMPA1P1-201ENST00000510718 842 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 MTCO1P35-201ENST00000515270 228 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.65□□□□□ -1.34
PDGFAP04085 COX6B1P4-201ENST00000519826 484 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 AC116917.1-201ENST00000520558 305 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 ARL2BPP5-201ENST00000523141 481 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PDGFAP04085 AC123904.3-201ENST00000547218 814 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.65□□□□□ -1.34
PDGFAP04085 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.65□□□□□ -1.34
PDGFAP04085 AC139493.1-201ENST00000604368 397 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 AC126177.8-201ENST00000618339 1015 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 AC008626.2-201ENST00000624425 248 ntBASIC6.65□□□□□ -1.34
PDGFAP04085 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.65□□□□□ -1.34
PDGFAP04085 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
PDGFAP04085 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.65□□□□□ -1.35
PDGFAP04085 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.65□□□□□ -1.35
PDGFAP04085 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.65□□□□□ -1.35
PDGFAP04085 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PDGFAP04085 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PDGFAP04085 ZNF680P1-201ENST00000436625 1469 ntBASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms