Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.47□□□□□ -1.69
SPTA1P02549 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SPTA1P02549 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.47□□□□□ -1.69
SPTA1P02549 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.47□□□□□ -1.69
SPTA1P02549 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.47□□□□□ -1.69
SPTA1P02549 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SPTA1P02549 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC4.47□□□□□ -1.69
SPTA1P02549 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.47□□□□□ -1.69
SPTA1P02549 WBP11P1-201ENST00000562560 1931 ntBASIC4.47□□□□□ -1.69
SPTA1P02549 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.47□□□□□ -1.69
SPTA1P02549 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.47□□□□□ -1.69
SPTA1P02549 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.47□□□□□ -1.69
SPTA1P02549 SNORA66-201ENST00000384792 133 ntBASIC4.47□□□□□ -1.69
SPTA1P02549 AL590762.2-201ENST00000395798 571 ntBASIC4.47□□□□□ -1.69
SPTA1P02549 PDSS1P1-201ENST00000422953 1114 ntBASIC4.47□□□□□ -1.69
SPTA1P02549 RPL36AP15-201ENST00000444514 266 ntBASIC4.47□□□□□ -1.69
SPTA1P02549 CEACAMP6-201ENST00000452007 574 ntBASIC4.47□□□□□ -1.69
SPTA1P02549 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.47□□□□□ -1.69
SPTA1P02549 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.47□□□□□ -1.69
SPTA1P02549 AC068993.1-201ENST00000546724 589 ntBASIC4.47□□□□□ -1.69
SPTA1P02549 MIR4301-201ENST00000577203 66 ntBASIC4.47□□□□□ -1.69
SPTA1P02549 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.47□□□□□ -1.69
SPTA1P02549 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SPTA1P02549 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SPTA1P02549 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC4.47□□□□□ -1.69
SPTA1P02549 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SPTA1P02549 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SPTA1P02549 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.47□□□□□ -1.69
SPTA1P02549 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SPTA1P02549 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SPTA1P02549 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SPTA1P02549 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SPTA1P02549 BRD7P6-201ENST00000431406 1860 ntBASIC4.47□□□□□ -1.69
SPTA1P02549 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SPTA1P02549 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SPTA1P02549 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.69
SPTA1P02549 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
SPTA1P02549 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
SPTA1P02549 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
SPTA1P02549 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SPTA1P02549 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SPTA1P02549 TRAV35-201ENST00000390462 330 ntBASIC4.46□□□□□ -1.69
SPTA1P02549 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.46□□□□□ -1.69
SPTA1P02549 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.46□□□□□ -1.69
SPTA1P02549 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.46□□□□□ -1.69
SPTA1P02549 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SPTA1P02549 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.46□□□□□ -1.69
SPTA1P02549 AC079168.2-201ENST00000453977 416 ntBASIC4.46□□□□□ -1.69
SPTA1P02549 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.46□□□□□ -1.69
SPTA1P02549 AC020779.1-201ENST00000478757 796 ntBASIC4.46□□□□□ -1.69
SPTA1P02549 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.46□□□□□ -1.69
SPTA1P02549 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.46□□□□□ -1.69
SPTA1P02549 AP005901.4-201ENST00000577336 569 ntBASIC4.46□□□□□ -1.69
SPTA1P02549 EIF1P5-201ENST00000585002 234 ntBASIC4.46□□□□□ -1.69
SPTA1P02549 AC073091.2-201ENST00000603205 907 ntBASIC4.46□□□□□ -1.69
SPTA1P02549 AC004777.1-201ENST00000624317 287 ntBASIC4.46□□□□□ -1.69
SPTA1P02549 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.69
SPTA1P02549 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
SPTA1P02549 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.46□□□□□ -1.69
SPTA1P02549 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.46□□□□□ -1.7
SPTA1P02549 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SPTA1P02549 RAD17P1-201ENST00000418130 2042 ntBASIC4.46□□□□□ -1.7
SPTA1P02549 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SPTA1P02549 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC4.46□□□□□ -1.7
SPTA1P02549 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SPTA1P02549 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.46□□□□□ -1.7
SPTA1P02549 AL672167.2-201ENST00000377164 879 ntBASIC4.46□□□□□ -1.7
SPTA1P02549 RNU1-13P-201ENST00000384499 162 ntBASIC4.46□□□□□ -1.7
SPTA1P02549 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.46□□□□□ -1.7
SPTA1P02549 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.46□□□□□ -1.7
SPTA1P02549 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.46□□□□□ -1.7
SPTA1P02549 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.46□□□□□ -1.7
SPTA1P02549 RPS17P8-201ENST00000434525 335 ntBASIC4.46□□□□□ -1.7
SPTA1P02549 MIR2116-201ENST00000517221 80 ntBASIC4.46□□□□□ -1.7
SPTA1P02549 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.46□□□□□ -1.7
SPTA1P02549 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
SPTA1P02549 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.46□□□□□ -1.7
SPTA1P02549 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SPTA1P02549 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.46□□□□□ -1.7
SPTA1P02549 MIR4420-201ENST00000583944 77 ntBASIC4.46□□□□□ -1.7
SPTA1P02549 KPNA2P3-201ENST00000584190 848 ntBASIC4.46□□□□□ -1.7
SPTA1P02549 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SPTA1P02549 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SPTA1P02549 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC4.46□□□□□ -1.7
SPTA1P02549 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SPTA1P02549 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SPTA1P02549 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SPTA1P02549 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.46□□□□□ -1.7
SPTA1P02549 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SPTA1P02549 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC4.46□□□□□ -1.7
SPTA1P02549 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SPTA1P02549 SNORA70.10-201ENST00000384515 134 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 MIR483-201ENST00000385070 76 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 AL390316.1-201ENST00000406279 553 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 AL050321.1-201ENST00000432363 400 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 CBX1P1-201ENST00000440184 427 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.45□□□□□ -1.7
SPTA1P02549 AL354714.3-201ENST00000447284 493 ntBASIC4.45□□□□□ -1.7
SPTA1P02549 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.45□□□□□ -1.7
SPTA1P02549 AC023818.1-201ENST00000498379 384 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms