Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC025674.1-201ENST00000507074 324 ntBASIC5.63□□□□□ -1.51
COL2A1P02458 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.63□□□□□ -1.51
COL2A1P02458 HNRNPRP2-201ENST00000528421 743 ntBASIC5.63□□□□□ -1.51
COL2A1P02458 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.63□□□□□ -1.51
COL2A1P02458 AL049830.4-201ENST00000555149 351 ntBASIC5.63□□□□□ -1.51
COL2A1P02458 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.63□□□□□ -1.51
COL2A1P02458 RPL12P25-202ENST00000598100 674 ntBASIC5.63□□□□□ -1.51
COL2A1P02458 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.63□□□□□ -1.51
COL2A1P02458 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.63□□□□□ -1.51
COL2A1P02458 AC103798.2-201ENST00000624292 632 ntBASIC5.63□□□□□ -1.51
COL2A1P02458 AP001153.1-201ENST00000641024 338 ntBASIC5.63□□□□□ -1.51
COL2A1P02458 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL2A1P02458 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.63□□□□□ -1.51
COL2A1P02458 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.63□□□□□ -1.51
COL2A1P02458 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL2A1P02458 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.62□□□□□ -1.51
COL2A1P02458 AC092451.3-201ENST00000625067 1343 ntBASIC5.62□□□□□ -1.51
COL2A1P02458 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL2A1P02458 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL2A1P02458 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
COL2A1P02458 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL2A1P02458 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL2A1P02458 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL2A1P02458 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL2A1P02458 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL2A1P02458 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.62□□□□□ -1.51
COL2A1P02458 AC092376.2-201ENST00000622621 4116 ntBASIC5.62□□□□□ -1.51
COL2A1P02458 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.62□□□□□ -1.51
COL2A1P02458 RNU1-82P-201ENST00000390851 165 ntBASIC5.62□□□□□ -1.51
COL2A1P02458 AL592293.2-201ENST00000422292 996 ntBASIC5.62□□□□□ -1.51
COL2A1P02458 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.62□□□□□ -1.51
COL2A1P02458 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.62□□□□□ -1.51
COL2A1P02458 AL451139.1-201ENST00000434718 346 ntBASIC5.62□□□□□ -1.51
COL2A1P02458 AC073143.1-201ENST00000436316 395 ntBASIC5.62□□□□□ -1.51
COL2A1P02458 YWHAZP2-201ENST00000440317 728 ntBASIC5.62□□□□□ -1.51
COL2A1P02458 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.62□□□□□ -1.51
COL2A1P02458 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL2A1P02458 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.62□□□□□ -1.51
COL2A1P02458 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
COL2A1P02458 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.62□□□□□ -1.51
COL2A1P02458 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.62□□□□□ -1.51
COL2A1P02458 AC093227.2-201ENST00000589357 285 ntBASIC5.62□□□□□ -1.51
COL2A1P02458 AL161637.1-201ENST00000622380 412 ntBASIC5.62□□□□□ -1.51
COL2A1P02458 AC004232.3-201ENST00000622977 525 ntBASIC5.62□□□□□ -1.51
COL2A1P02458 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.62□□□□□ -1.51
COL2A1P02458 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.62□□□□□ -1.51
COL2A1P02458 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL2A1P02458 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL2A1P02458 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.62□□□□□ -1.51
COL2A1P02458 AC133552.1-201ENST00000569988 4007 ntBASIC5.62□□□□□ -1.51
COL2A1P02458 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL2A1P02458 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL2A1P02458 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL2A1P02458 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.61□□□□□ -1.51
COL2A1P02458 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COL2A1P02458 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COL2A1P02458 NPM1P36-201ENST00000415681 835 ntBASIC5.61□□□□□ -1.51
COL2A1P02458 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.61□□□□□ -1.51
COL2A1P02458 TRGV7-201ENST00000427089 353 ntBASIC5.61□□□□□ -1.51
COL2A1P02458 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.61□□□□□ -1.51
COL2A1P02458 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.61□□□□□ -1.51
COL2A1P02458 snoU13.22-201ENST00000459428 104 ntBASIC5.61□□□□□ -1.51
COL2A1P02458 MTND4LP2-201ENST00000502312 285 ntBASIC5.61□□□□□ -1.51
COL2A1P02458 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.61□□□□□ -1.51
COL2A1P02458 AC005191.1-201ENST00000603950 358 ntBASIC5.61□□□□□ -1.51
COL2A1P02458 AC067959.1-201ENST00000604334 379 ntBASIC5.61□□□□□ -1.51
COL2A1P02458 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
COL2A1P02458 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL2A1P02458 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL2A1P02458 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COL2A1P02458 AL121950.1-201ENST00000624993 2077 ntBASIC5.61□□□□□ -1.51
COL2A1P02458 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL2A1P02458 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL2A1P02458 MFSD8-220ENST00000641243 1422 ntBASIC5.61□□□□□ -1.51
COL2A1P02458 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.61□□□□□ -1.51
COL2A1P02458 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL2A1P02458 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL2A1P02458 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL2A1P02458 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL2A1P02458 AC009951.1-201ENST00000623674 2614 ntBASIC5.61□□□□□ -1.51
COL2A1P02458 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.6□□□□□ -1.51
COL2A1P02458 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL2A1P02458 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COL2A1P02458 RPL7P58-201ENST00000402913 758 ntBASIC5.6□□□□□ -1.51
COL2A1P02458 ARL4AP5-201ENST00000404372 599 ntBASIC5.6□□□□□ -1.51
COL2A1P02458 U3.35-201ENST00000408405 208 ntBASIC5.6□□□□□ -1.51
COL2A1P02458 RPS21P8-201ENST00000413365 247 ntBASIC5.6□□□□□ -1.51
COL2A1P02458 RPL12P34-201ENST00000424532 479 ntBASIC5.6□□□□□ -1.51
COL2A1P02458 YY1P1-201ENST00000427625 668 ntBASIC5.6□□□□□ -1.51
COL2A1P02458 AC073358.1-201ENST00000505671 684 ntBASIC5.6□□□□□ -1.51
COL2A1P02458 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
COL2A1P02458 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.6□□□□□ -1.51
COL2A1P02458 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.6□□□□□ -1.51
COL2A1P02458 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.6□□□□□ -1.51
COL2A1P02458 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms