Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC074276.2-201ENST00000619891 348 ntBASIC4.17□□□□□ -1.74
HLA-DQB1P01920 AC127024.6-201ENST00000621598 424 ntBASIC4.17□□□□□ -1.74
HLA-DQB1P01920 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQB1P01920 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQB1P01920 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQB1P01920 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQB1P01920 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
HLA-DQB1P01920 CR383656.5-201ENST00000547616 1340 ntBASIC4.17□□□□□ -1.74
HLA-DQB1P01920 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQB1P01920 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQB1P01920 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC009804.1-201ENST00000400949 179 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AL645733.1-201ENST00000402250 217 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 RN7SKP293-201ENST00000411389 296 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 BTG3P1-201ENST00000435859 716 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 TCEA1P1-201ENST00000449716 880 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 RPS26P41-201ENST00000450370 284 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC010350.1-201ENST00000504908 231 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AK4P6-201ENST00000505168 528 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC006499.6-201ENST00000511169 607 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 HMGB3P13-201ENST00000511263 607 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC015795.1-201ENST00000513669 327 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 HMGB2P1-201ENST00000591146 634 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AL359757.1-201ENST00000623176 255 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AC087821.1-201ENST00000623639 567 ntBASIC4.16□□□□□ -1.74
HLA-DQB1P01920 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQB1P01920 AL121950.1-201ENST00000624993 2077 ntBASIC4.15□□□□□ -1.74
HLA-DQB1P01920 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DQB1P01920 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DQB1P01920 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
HLA-DQB1P01920 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DQB1P01920 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DQB1P01920 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 AC107977.1-201ENST00000355745 939 ntBASIC4.15□□□□□ -1.75
HLA-DQB1P01920 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 RN7SKP167-201ENST00000411047 285 ntBASIC4.15□□□□□ -1.75
HLA-DQB1P01920 RPL24P2-201ENST00000421023 475 ntBASIC4.15□□□□□ -1.75
HLA-DQB1P01920 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 AL161636.2-201ENST00000445179 927 ntBASIC4.15□□□□□ -1.75
HLA-DQB1P01920 AL354714.3-201ENST00000447284 493 ntBASIC4.15□□□□□ -1.75
HLA-DQB1P01920 AC104306.1-201ENST00000449702 371 ntBASIC4.15□□□□□ -1.75
HLA-DQB1P01920 IGHV5-78-201ENST00000450948 295 ntBASIC4.15□□□□□ -1.75
HLA-DQB1P01920 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 RN7SL741P-201ENST00000482473 289 ntBASIC4.15□□□□□ -1.75
HLA-DQB1P01920 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 AC020634.1-201ENST00000608701 549 ntBASIC4.15□□□□□ -1.75
HLA-DQB1P01920 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.15□□□□□ -1.75
HLA-DQB1P01920 AC005840.5-201ENST00000619166 599 ntBASIC4.15□□□□□ -1.75
HLA-DQB1P01920 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQB1P01920 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms