Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VPS4BO75351 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS4BO75351 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS4BO75351 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS4BO75351 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS4BO75351 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS4BO75351 OR5M12P-201ENST00000423388 929 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 RPS27AP6-201ENST00000427962 448 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS4BO75351 AL627308.1-201ENST00000435693 821 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS4BO75351 OR6K5P-201ENST00000447050 945 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 AL050341.1-201ENST00000447743 313 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 OR51B8P-201ENST00000449892 769 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS4BO75351 RPS6P2-201ENST00000454208 705 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 RPS27AP2-201ENST00000457576 465 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 AL157777.1-201ENST00000468100 304 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 AC079203.1-201ENST00000487972 404 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS4BO75351 SUMO2P4-201ENST00000504193 276 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS4BO75351 AC117522.2-201ENST00000510049 657 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 AC008837.1-201ENST00000511513 412 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 AC074087.1-201ENST00000512059 724 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 GAPDHP62-201ENST00000515313 990 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 RN7SKP34-201ENST00000516142 244 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 WBP1LP3-201ENST00000523033 208 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS4BO75351 AC007834.2-201ENST00000536310 343 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS4BO75351 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS4BO75351 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS4BO75351 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS4BO75351 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS4BO75351 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VPS4BO75351 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS4BO75351 AC021171.1-201ENST00000603137 706 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 SUMO2P15-201ENST00000604285 278 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 AC108673.3-201ENST00000609183 335 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 MIR6793-201ENST00000612376 63 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 FRG1HP-204ENST00000617940 757 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 MIR6719-201ENST00000622428 87 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 AP002782.1-201ENST00000623107 614 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS4BO75351 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS4BO75351 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS4BO75351 AC125336.1-201ENST00000508893 2827 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS4BO75351 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VPS4BO75351 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS4BO75351 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS4BO75351 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS4BO75351 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS4BO75351 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS4BO75351 MTND5P31-201ENST00000419366 1374 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.66□□□□□ -1.5
VPS4BO75351 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VPS4BO75351 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS4BO75351 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS4BO75351 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS4BO75351 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS4BO75351 AC097063.1-201ENST00000426714 1797 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS4BO75351 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS4BO75351 RNA5SP110-201ENST00000362638 115 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 RNU4-92P-201ENST00000363783 136 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS4BO75351 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS4BO75351 SNORD116-8-201ENST00000384365 95 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 RNU6-1242P-201ENST00000391052 103 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 LRRC37BP1-201ENST00000398851 714 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS4BO75351 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS4BO75351 OR10T1P-201ENST00000424327 947 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS4BO75351 NPM1P18-201ENST00000434232 732 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.65□□□□□ -1.5
VPS4BO75351 AC092647.3-201ENST00000443044 633 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 CYCSP51-201ENST00000443545 318 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 AC023271.1-201ENST00000445936 1090 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 RPL7P45-201ENST00000455851 743 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 SNRPCP3-201ENST00000474888 476 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS4BO75351 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS4BO75351 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS4BO75351 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS4BO75351 DUXAP6-201ENST00000553858 601 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS4BO75351 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS4BO75351 AL109741.3-201ENST00000561748 592 ntBASIC5.65□□□□□ -1.5
VPS4BO75351 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS4BO75351 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.65□□□□□ -1.5
VPS4BO75351 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS4BO75351 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS4BO75351 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS4BO75351 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms