Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 ELOCP28-201ENST00000590044 317 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC005255.1-201ENST00000593748 216 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC125494.3-201ENST00000602759 455 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AL136131.3-201ENST00000607600 188 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 MIR6762-201ENST00000613340 86 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC138907.10-201ENST00000623708 983 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HMGB1P1B2RPK0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.59□□□□□ -1.52
HMGB1P1B2RPK0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HMGB1P1B2RPK0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
HMGB1P1B2RPK0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HMGB1P1B2RPK0 AC217777.1-201ENST00000570034 1471 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 LINC01109-201ENST00000603837 3081 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AL139135.1-201ENST00000412675 209 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AL158825.1-201ENST00000414735 521 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AC114814.2-201ENST00000419195 485 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AC023141.6-201ENST00000429418 337 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AC128677.1-201ENST00000436016 442 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AC010086.1-201ENST00000437359 1052 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 UBE2V1P5-201ENST00000440070 405 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 TXNP5-201ENST00000441043 315 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 HMGB1P48-201ENST00000446155 598 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 CEACAMP6-201ENST00000452007 574 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 RNA5SP103-201ENST00000459503 118 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 RN7SL205P-201ENST00000490174 284 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 DUTP7-201ENST00000507982 486 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 COL6A4P2-205ENST00000509855 506 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AC025768.1-201ENST00000510057 267 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AC005351.1-201ENST00000511152 786 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 HSD3BP3-201ENST00000514706 994 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 MIR4260-201ENST00000583107 67 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AF230666.2-201ENST00000602328 725 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AC083899.3-201ENST00000603413 594 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 MIR8082-201ENST00000612488 81 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 MIR6731-201ENST00000614863 72 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 RMST_10.1-201ENST00000616309 154 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AL163051.2-201ENST00000618976 735 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 AL022393.1-201ENST00000625142 1677 ntBASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB1P1B2RPK0 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 ENSAP3-201ENST00000312710 333 ntBASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 RN7SKP292-201ENST00000365522 317 ntBASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGB1P1B2RPK0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms