Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AP000866.6-201ENST00000638898 3579 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC025574.1-201ENST00000554784 1653 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC083806.2-201ENST00000617795 2685 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
PCDHGA11Q9Y5H2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.02□□□□□ -1.28
PCDHGA11Q9Y5H2 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.02□□□□□ -1.28
PCDHGA11Q9Y5H2 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.28
PCDHGA11Q9Y5H2 AC010928.1-201ENST00000592477 1447 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AC006116.1-201ENST00000587908 2171 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 KARSP2-201ENST00000415696 1639 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AL355488.2-201ENST00000609909 2850 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AL512646.1-201ENST00000269395 1077 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 SNORA51.2-201ENST00000364595 132 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 RNU6-769P-201ENST00000384407 104 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AL136131.1-201ENST00000406079 803 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AL359704.1-201ENST00000411586 781 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AC009237.9-201ENST00000414800 347 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 RPL7P57-201ENST00000423238 740 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 RIMKLBP2-201ENST00000424737 654 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AL445669.1-201ENST00000426743 755 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 PRPS1P2-201ENST00000430496 937 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 RPEP2-201ENST00000432149 701 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AL591379.2-201ENST00000450223 397 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 PMS2P11-201ENST00000451831 574 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 RPL12P31-201ENST00000478433 450 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AC146944.3-201ENST00000509969 371 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 RNU6-1045P-201ENST00000516321 107 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 RNU6-445P-201ENST00000516949 107 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 RN7SKP98-201ENST00000517070 156 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 RNU6-1003P-201ENST00000517099 105 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AC120036.3-201ENST00000517826 292 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AC008562.1-201ENST00000521763 330 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 FOLH1B-202ENST00000529567 2145 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 OR4A12P-201ENST00000530847 918 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 COX6CP11-201ENST00000555293 229 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AC044860.3-201ENST00000559957 368 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AC015917.1-201ENST00000579654 510 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AC018638.8-201ENST00000588755 281 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AP001120.4-201ENST00000590231 108 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 BNIP3P22-201ENST00000593399 556 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AC027243.2-201ENST00000602530 724 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 COX6CP4-201ENST00000605798 228 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 MIR98-201ENST00000606724 119 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 RNU6-87P-201ENST00000607561 108 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 MIR6762-201ENST00000613340 86 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 FAM27E3-202ENST00000614611 340 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AL590396.3-201ENST00000636334 300 ntBASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHGA11Q9Y5H2 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHGA11Q9Y5H2 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms