Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MTCO2P5-201ENST00000422621 426 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 CYP4F34P-201ENST00000425951 481 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 RPL5P34-201ENST00000426545 891 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 NMD3P1-201ENST00000439704 1488 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 AC023274.2-201ENST00000445264 521 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 WBP1LP1-201ENST00000460451 896 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 AP005597.4-201ENST00000526762 229 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 OR5F2P-201ENST00000532761 941 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 SUB1P2-201ENST00000556401 297 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 AC013283.1-201ENST00000557282 492 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 HMGN1P26-201ENST00000558737 303 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 RN7SL178P-201ENST00000582930 304 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 MIR98-201ENST00000606724 119 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 uc_338.5-201ENST00000611839 155 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 RMST_7.1-201ENST00000621935 268 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 AC123769.2-201ENST00000624332 5984 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AC025574.1-201ENST00000554784 1653 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 ASNSP1-204ENST00000641977 1664 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 OR10D1P-201ENST00000355343 936 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 IL6-206ENST00000407492 926 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AC009413.1-201ENST00000414823 399 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 GAPDHP69-201ENST00000425504 1008 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 RPEP2-201ENST00000432149 701 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 RPL22P17-201ENST00000438729 315 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AC019080.2-201ENST00000453859 394 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 RN7SL267P-201ENST00000485107 261 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 RNU6-835P-201ENST00000516974 104 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 RNU6-1003P-201ENST00000517099 105 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AC034105.3-201ENST00000565294 442 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AC006504.6-201ENST00000590142 199 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AP001521.1-201ENST00000609150 300 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 AC024940.5-201ENST00000622889 474 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 TPTEP1-208ENST00000636884 213 ntBASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms