Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC006390.1-201ENST00000508068 283 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 NDUFA3P2-201ENST00000531434 232 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC009117.1-201ENST00000563948 554 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AL359999.1-201ENST00000604513 294 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC004805.2-201ENST00000605382 482 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC005618.4-201ENST00000625053 554 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC132825.6-201ENST00000638861 357 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 JAML-213ENST00000640745 951 ntTSL 5 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC025574.1-201ENST00000554784 1653 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC096992.2-201ENST00000609553 1684 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 MIR431-201ENST00000385266 114 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC245036.1-201ENST00000391727 309 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC121334.1-201ENST00000396414 802 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AL136116.1-201ENST00000403591 381 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 RNU6-370P-201ENST00000411008 104 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 DUTP6-201ENST00000425573 462 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 FO393419.3-201ENST00000428741 282 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC073900.1-201ENST00000429766 776 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC027124.1-201ENST00000440852 466 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AL121871.1-201ENST00000443413 436 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 MED28P2-201ENST00000475771 317 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 RPL7AP30-201ENST00000482859 796 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC091885.1-201ENST00000506658 268 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 IGHVIII-26-1-201ENST00000520387 250 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC022882.1-201ENST00000532142 501 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC126177.6-201ENST00000550420 1009 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 GNG2-215ENST00000557376 573 ntTSL 4 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 RN7SL689P-201ENST00000577215 297 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC090774.2-201ENST00000584708 322 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC010327.2-201ENST00000587647 488 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC092032.1-201ENST00000603090 165 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 FXYD6P1-201ENST00000604857 285 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AL451049.1-201ENST00000608672 497 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC020634.1-201ENST00000608701 549 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AL356585.10-201ENST00000641883 123 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 NLRP3P1-201ENST00000622303 1785 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 MTND5P28-201ENST00000438005 1594 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 AP000766.1-201ENST00000561746 4140 ntBASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC9.41□□□□□ -0.9
TRIM35Q9UPQ4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 API5P2-201ENST00000397055 1498 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 Y_RNA.153-201ENST00000363615 91 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 SNORD113-1-201ENST00000365321 69 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 SNORA70.5-201ENST00000365519 135 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 RNU6-1055P-201ENST00000391085 107 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 RN7SKP121-201ENST00000410842 305 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 RN7SKP30-201ENST00000411373 334 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 CHEK2P3-201ENST00000416118 248 ntBASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms