Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MIR3934-201ENST00000579806 107 ntBASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 AC104785.1-201ENST00000603220 588 ntBASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 AC005252.1-201ENST00000604518 1063 ntBASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 AC087783.2-201ENST00000605070 562 ntBASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 RNU6-84P-201ENST00000607737 102 ntBASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 AC093799.2-201ENST00000610062 578 ntBASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 AC092747.4-201ENST00000620519 1861 ntBASIC5.88□□□□□ -1.47
HDAC6Q9UBN7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AL360270.2-201ENST00000562952 5985 ntBASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 EI24P4-201ENST00000423683 1078 ntBASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AC104837.2-201ENST00000427236 424 ntBASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 RPS4XP12-201ENST00000461747 709 ntBASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 RPS3AP41-201ENST00000462701 778 ntBASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AC105918.1-201ENST00000474399 838 ntBASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AC105233.1-201ENST00000498840 781 ntBASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AC016550.1-201ENST00000505348 785 ntBASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AC092593.2-201ENST00000513866 913 ntBASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC6Q9UBN7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 AL592494.2-201ENST00000425455 1548 ntBASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 U3.3-201ENST00000362986 216 ntBASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 SNORD56.6-201ENST00000384569 71 ntBASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 AL035419.1-201ENST00000397037 564 ntBASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 SCAND3P1-201ENST00000439854 1060 ntBASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 AC090804.1-201ENST00000448870 490 ntBASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 OR52E3P-201ENST00000452083 936 ntBASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 RPS3AP53-201ENST00000454716 778 ntBASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 PSAT1P4-201ENST00000466500 526 ntBASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 AC097484.1-201ENST00000471148 389 ntBASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.86□□□□□ -1.47
HDAC6Q9UBN7 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms