Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 AP002373.2-201ENST00000541631 1060 ntBASIC5.9□□□□□ -1.46
UPF2Q9HAU5 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 AC090888.3-201ENST00000558917 509 ntBASIC5.9□□□□□ -1.46
UPF2Q9HAU5 MIR6837-201ENST00000620884 64 ntBASIC5.9□□□□□ -1.46
UPF2Q9HAU5 AC004232.3-201ENST00000622977 525 ntBASIC5.9□□□□□ -1.46
UPF2Q9HAU5 AC103798.2-201ENST00000624292 632 ntBASIC5.9□□□□□ -1.46
UPF2Q9HAU5 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
UPF2Q9HAU5 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.9□□□□□ -1.47
UPF2Q9HAU5 AL136164.3-201ENST00000624429 3978 ntBASIC5.9□□□□□ -1.47
UPF2Q9HAU5 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
UPF2Q9HAU5 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 CDY11P-201ENST00000447168 1651 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 TMSB4XP4-201ENST00000323496 618 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 RN7SKP293-201ENST00000411389 296 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 RPL21P108-201ENST00000413857 481 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AC244033.1-201ENST00000426826 870 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AC092447.2-201ENST00000435487 669 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AL161636.2-201ENST00000445179 927 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 VN1R96P-201ENST00000446052 858 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AC005008.1-201ENST00000456151 612 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 OR7L1P-201ENST00000456181 380 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 RNU7-157P-201ENST00000459600 66 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 MTND3P6-201ENST00000485242 339 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AC116562.1-201ENST00000485355 781 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AC087272.1-201ENST00000523624 533 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AC008521.2-201ENST00000591021 259 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 uc_338.18-201ENST00000615451 175 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AC099494.2-201ENST00000623371 978 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AC136428.4-201ENST00000634254 1155 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 AC000123.3-201ENST00000624029 4975 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 SAMMSON-213ENST00000641336 1521 ntBASIC5.89□□□□□ -1.47
UPF2Q9HAU5 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UPF2Q9HAU5 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AL121950.1-201ENST00000624993 2077 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 RNU6-249P-201ENST00000363016 102 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 RNU1-43P-201ENST00000365052 165 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 MIR195-201ENST00000385194 87 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 Z97832.1-201ENST00000402490 328 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AL357515.1-201ENST00000402967 542 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AP000281.1-201ENST00000444036 316 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 SEPT7P3-201ENST00000455017 621 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 RN7SL41P-201ENST00000476144 297 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 RN7SL184P-201ENST00000488308 297 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 RN7SL244P-201ENST00000493405 297 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 COX6B1P5-201ENST00000509843 249 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 RFPL4AP5-201ENST00000514977 504 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 CYCSP28-201ENST00000534284 321 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AP000919.1-201ENST00000582850 985 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AC007204.2-201ENST00000615022 616 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 AC005086.4-201ENST00000623065 213 ntBASIC5.88□□□□□ -1.47
UPF2Q9HAU5 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms