Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 SCAND3P1-201ENST00000439854 1060 ntBASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 SNRPFP2-201ENST00000440710 251 ntBASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AC114878.1-201ENST00000441166 358 ntBASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AC011753.3-201ENST00000443436 406 ntBASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 PSMC1P13-201ENST00000458195 985 ntBASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AC021006.1-201ENST00000489849 553 ntBASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AL845552.1-201ENST00000556820 323 ntBASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AC008115.3-201ENST00000614874 549 ntBASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AC074101.1-201ENST00000637861 241 ntBASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 AC090181.3-201ENST00000624777 1514 ntBASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.02□□□□□ -1.61
VIPAS39Q9H9C1 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 RN7SKP247-201ENST00000411094 308 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 NPM1P26-201ENST00000426339 738 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 RSL24D1P8-201ENST00000434442 492 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 ARAFP2-201ENST00000440565 559 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 EEF1B2P3-201ENST00000447718 678 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 RPL5P30-201ENST00000465511 891 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC098583.1-201ENST00000480875 255 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 RPL7P6-201ENST00000480903 738 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 HSD3BP3-201ENST00000514706 994 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC008147.3-201ENST00000548666 354 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC008759.1-201ENST00000589783 983 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC012213.4-201ENST00000606457 354 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AL359091.2-201ENST00000609303 556 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC073575.2-201ENST00000614212 627 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AL158196.1-201ENST00000616786 434 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC244100.4-201ENST00000617747 388 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 MIR6806-201ENST00000622141 64 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC129778.1-202ENST00000623812 261 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AL591379.1-207ENST00000635982 261 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 OR10AB1P-202ENST00000641219 1686 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AL592182.3-201ENST00000642132 3304 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC068254.2-201ENST00000623938 3577 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 AC087565.3-202ENST00000642085 1603 ntBASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VIPAS39Q9H9C1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VIPAS39Q9H9C1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VIPAS39Q9H9C1 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5□□□□□ -1.61
VIPAS39Q9H9C1 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms