Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 PRMT5P1-201ENST00000514351 598 ntBASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 RNU6-1308P-201ENST00000516817 103 ntBASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 RARSP1-201ENST00000542842 1418 ntBASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 AC018638.7-201ENST00000605836 1114 ntBASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 AC010245.2-201ENST00000606908 1167 ntBASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 AC096586.1-201ENST00000610267 561 ntBASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 MIR6798-201ENST00000612887 67 ntBASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 AC011939.3-201ENST00000613686 466 ntBASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 FAM27E2-201ENST00000619668 403 ntBASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 AC015660.5-201ENST00000623238 564 ntBASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 OR8B1P-202ENST00000641132 1178 ntBASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 MFSD8-239ENST00000641590 2479 ntBASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 AC239868.2-201ENST00000564237 4527 ntBASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 HSPD1P9-201ENST00000420325 1636 ntBASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
AMBRA1Q9C0C7 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 RNU1-134P-201ENST00000362935 165 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 RNU4-31P-201ENST00000384211 141 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 RNA5SP91-201ENST00000390902 119 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 SNORA17A-201ENST00000391185 133 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 RPL11P3-201ENST00000395256 523 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AL590806.1-201ENST00000415818 853 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 TRGV6-201ENST00000417928 299 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 ELOCP9-201ENST00000418624 239 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 RPS3P2-201ENST00000421346 701 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 HSPE1P16-201ENST00000426640 348 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AL445928.1-201ENST00000435545 222 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 YWHAZP2-201ENST00000440317 728 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 RPL34P26-201ENST00000445636 354 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 PPIAP7-201ENST00000454070 489 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 NXT1P1-201ENST00000458481 316 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC093890.1-201ENST00000502554 540 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC008629.2-201ENST00000503783 483 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 MRPS33P3-201ENST00000513456 322 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AP000620.1-201ENST00000527147 504 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC092332.1-201ENST00000563684 829 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 MRPS21P8-201ENST00000569196 235 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC005951.1-201ENST00000576706 485 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC121247.2-201ENST00000604776 136 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC011374.2-201ENST00000607135 526 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AP001437.1-201ENST00000608783 456 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 369.1 ms