Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 TRAPPC2-201ENST00000359680 2716 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 CALCOCO1-202ENST00000430117 2706 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RASGRP1-213ENST00000561180 2707 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PLS1-202ENST00000457734 3706 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ITGB6-205ENST00000428609 2576 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 CAMK2G-204ENST00000351293 3563 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNRD1ASP-212ENST00000420251 2430 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 TMEM108-AS1-202ENST00000505721 2427 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC026464.2-201ENST00000567834 2421 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ARHGAP32-206ENST00000527272 5289 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ABI1-201ENST00000346832 3289 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 GNPDA1-201ENST00000311337 2273 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 UBTFL11-201ENST00000428234 2252 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SERINC1-201ENST00000339697 3137 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 FAM196A-201ENST00000424811 3149 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 CYB561A3-221ENST00000546151 3986 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 CST4-201ENST00000217423 751 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RPS13-201ENST00000228140 491 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RPL24P4-201ENST00000326586 421 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU105C-201ENST00000362342 209 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-414P-201ENST00000363705 104 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-478P-201ENST00000363904 110 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 Y_RNA.264-201ENST00000364665 102 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 LAMTOR2-202ENST00000368304 521 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 C20orf173-202ENST00000374345 985 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-969P-201ENST00000383900 105 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 Y_RNA.405-201ENST00000383979 100 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 Y_RNA.451-201ENST00000384200 100 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 Y_RNA.524-201ENST00000384564 100 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 Y_RNA.561-201ENST00000384694 100 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MT-TT-201ENST00000387460 66 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR526A2-201ENST00000390198 65 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 TRBV5-5-201ENST00000390372 350 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 KRT18P17-201ENST00000396959 1279 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF35-203ENST00000399560 564 ntTSL 4 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AL109941.1-201ENST00000401925 229 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RPL12P23-201ENST00000405880 490 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR1912-201ENST00000410389 80 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SNORD12B-201ENST00000410433 91 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5SP41-201ENST00000411020 101 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AL023773.2-201ENST00000412173 1005 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 KCNIP2-AS1-201ENST00000412353 850 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC25A26-203ENST00000413054 1096 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AL592148.1-201ENST00000413568 445 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ARHGAP42P2-201ENST00000416089 2140 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MIATNB-201ENST00000417083 706 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AL158207.1-201ENST00000417984 341 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MT1XP1-201ENST00000421314 186 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PROSER3-203ENST00000421853 650 ntAPPRIS ALT2 TSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AL139246.3-201ENST00000424215 626 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 EIF4EP4-201ENST00000424916 578 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AL357632.1-201ENST00000426688 643 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR3681HG-203ENST00000429878 558 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC011998.2-201ENST00000430884 473 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC245036.4-201ENST00000432400 319 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 SNRPCP1-201ENST00000433292 458 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 OR13C6P-201ENST00000433495 950 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC01716-201ENST00000434176 698 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 TIMM9P1-201ENST00000436122 256 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 IMMP2L-203ENST00000437687 243 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PROCA1-204ENST00000439862 1137 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AP000350.3-201ENST00000440099 289 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 ING4-206ENST00000444704 678 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AL358613.1-201ENST00000444965 442 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC000111.2-201ENST00000448200 210 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AL138895.1-201ENST00000448674 173 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RPL39P25-201ENST00000449384 154 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PPIAP28-201ENST00000458378 485 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RN7SL683P-201ENST00000460552 270 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 PSMD6-AS1-201ENST00000462717 441 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC006967.1-201ENST00000467608 589 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RN7SL58P-201ENST00000473445 294 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RPSAP55-201ENST00000477347 876 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC015724.1-201ENST00000478577 156 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 MT1DP-202ENST00000486551 150 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AP003041.1-201ENST00000487566 287 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 RPL30P5-201ENST00000494923 336 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC044787.1-201ENST00000497325 792 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 GUSBP8-201ENST00000502652 679 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 TECRP2-201ENST00000503270 928 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 HSPD1P18-201ENST00000504252 244 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 TRMT112P1-201ENST00000505515 351 ntBASIC1.95□□□□□ -2.1
KRTAP4-4Q9BYR3 HMGN2P4-201ENST00000506772 381 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms