Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RHOXF2Q9BQY4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.12□□□□□ -1.59
RHOXF2Q9BQY4 ATP5J2P6-201ENST00000565203 266 ntBASIC5.12□□□□□ -1.59
RHOXF2Q9BQY4 AL133406.3-201ENST00000606817 541 ntBASIC5.12□□□□□ -1.59
RHOXF2Q9BQY4 AC009704.2-201ENST00000618739 483 ntBASIC5.12□□□□□ -1.59
RHOXF2Q9BQY4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.12□□□□□ -1.59
RHOXF2Q9BQY4 AC140113.4-201ENST00000622087 222 ntBASIC5.12□□□□□ -1.59
RHOXF2Q9BQY4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RHOXF2Q9BQY4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.12□□□□□ -1.59
RHOXF2Q9BQY4 AL445487.1-201ENST00000415694 1580 ntBASIC5.12□□□□□ -1.59
RHOXF2Q9BQY4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.12□□□□□ -1.59
RHOXF2Q9BQY4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 DDX18P3-201ENST00000404856 2007 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 RN7SKP240-201ENST00000410583 375 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 CYCSP10-201ENST00000417973 294 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 MTCO1P51-201ENST00000427672 1060 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AC022022.1-201ENST00000430304 178 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 PPIAP13-201ENST00000434706 478 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AC002504.1-201ENST00000438281 691 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 Z92846.1-201ENST00000456203 268 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 EIF2S2P5-201ENST00000457635 968 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 RPS4XP20-201ENST00000505751 772 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AC011270.1-201ENST00000558606 583 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 HMGB3P26-201ENST00000560051 582 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 NDUFA5P11-201ENST00000567995 343 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 MTND2P13-201ENST00000577438 1039 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AC090312.1-201ENST00000580637 348 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AC087283.1-201ENST00000604029 1074 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AC091979.2-201ENST00000607514 214 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AL049794.2-201ENST00000616301 365 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AC131238.1-201ENST00000617135 328 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AC004232.3-201ENST00000622977 525 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 AC079298.2-201ENST00000623885 459 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 Z95327.2-201ENST00000414579 1873 ntBASIC5.11□□□□□ -1.59
RHOXF2Q9BQY4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 AC011155.1-201ENST00000316512 456 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 RNA5SP372-201ENST00000390836 115 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 AL136131.1-201ENST00000406079 803 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 FAM96AP1-201ENST00000430879 482 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 AL138787.1-202ENST00000437804 898 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 RPL12P11-201ENST00000439970 501 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 TCEA1P1-201ENST00000449716 880 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 RPL7P6-201ENST00000480903 738 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 UBA52P3-201ENST00000491303 382 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 AF186190.1-201ENST00000517470 480 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 MIR1273E-201ENST00000581165 102 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 MIR4505-201ENST00000582238 73 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 AL023881.1-201ENST00000621088 301 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 AL359742.1-201ENST00000622497 540 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 AC017104.4-201ENST00000636283 1592 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 CASC19-222ENST00000641321 1173 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 OR13C1P-202ENST00000641378 2919 ntBASIC5.1□□□□□ -1.59
RHOXF2Q9BQY4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RHOXF2Q9BQY4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms